RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DGKZQ13574 1117 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 WASH2PQ6VEQ5 465 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 H3BM21 787 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ZBTB14O43829 449 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 RGS20O76081 388 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 MMP1P03956 469 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 TNFRSF8P28908 595 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ADD2P35612 726 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ZNF200P98182 395 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 GABPB1Q06547 395 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 SLC4A11Q8NBS3 891 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 AK5Q9Y6K8 562 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 MATN4O95460 622 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ADSLP30566 484 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 PPM1AP35813 382 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 IST1P53990 364 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 IQSEC1Q6DN90 963 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 FERD3LQ96RJ6 166 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 EPS8L2Q9H6S3 715 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ITGB3P05106 788 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 RPP38P78345 283 aaKnown RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 ZNF611Q8N823 705 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 TIPINQ9BVW5 301 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 TMEM120AQ9BXJ8 343 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 FCHO1O14526 889 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 CYP26A1O43174 497 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 SLC2A4P14672 509 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 TPP2P29144 1249 aaPredicted RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 PPP1R18Q6NYC8 613 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ADGRF2Q8IZF7 708 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ERP27Q96DN0 273 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PGLYRP2Q96PD5 576 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.92□□□□□ -0.34
TCF4-248ENST00000616053 CDY2AQ9Y6F7 541 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 CDY1Q9Y6F8 540 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ALDH3A2P51648 485 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 COASYQ13057 564 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PTGISQ16647 500 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 TFDP3Q5H9I0 405 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 RFT1Q96AA3 541 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 RIBC2Q9H4K1 309 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 NKIRAS2Q9NYR9 191 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 LDOC1O95751 146 aaPredicted RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 UGT1A5P35504 534 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 RAPSNQ13702 412 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 NR6A1Q15406 480 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 BHLHB9Q6PI77 547 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 CDYL2Q8N8U2 506 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 RAD54LQ92698 747 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 RADILQ96JH8 1075 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 FBXO44Q9H4M3 255 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 SLC1A1P43005 524 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PRKCEQ02156 737 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PDCD4Q53EL6 469 aaKnown RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 C12orf60Q5U649 245 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PGM2L1Q6PCE3 622 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ABRAXAS1Q6UWZ7 409 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 SHCBP1LQ9BZQ2 653 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PAK5Q9P286 719 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 TSPAN1O60635 241 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 GALK1P51570 392 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 ITGA1P56199 1179 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 TTC33Q6PID6 262 aaPredicted RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 PROM2Q8N271 834 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 IL12RB2Q99665 862 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 PLEKHA1Q9HB21 404 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 FKBP14Q9NWM8 211 aa12.92□□□□□ -0.34
TCF4-248ENST00000616053 SCAF8Q9UPN6 1271 aaKnown RBP12.92□□□□□ -0.34
TCF4-248ENST00000616053 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ERCC1P07992 297 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 LYSMD3Q7Z3D4 306 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 MYOZ2Q9NPC6 264 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 CNTNAP2Q9UHC6 1331 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 A0A1W2PRG6 482 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 NQO1P15559 274 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 KELP23276 732 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ALLCQ8N6M5 410 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PMEPA1Q969W9 287 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 C10orf88Q9H8K7 445 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 MAN1B1Q9UKM7 699 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms