RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 HLA-FP30511 346 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 DLG4P78352 724 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 EHHADHQ08426 723 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 PRAMEF14Q5SWL7 426 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 ZNF776Q68DI1 518 aaPredicted RBP17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 KIAA0895LQ68EN5 471 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 FAM217AQ8IXS0 508 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 SNIP1Q8TAD8 396 aaKnown RBP17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 GOLGA1Q92805 767 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 ARID3AQ99856 593 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 C7orf25Q9BPX7 421 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 DUSP16Q9BY84 665 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 NRSN2Q9GZP1 204 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 USP3Q9Y6I4 520 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 HLA-DRAP01903 254 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 IGHV4-34P06331 123 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 CASP1P29466 404 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 ACADVLP49748 655 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 SV2AQ7L0J3 742 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 AHI1Q8N157 1196 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 EID2Q8N6I1 236 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 ORAI3Q9BRQ5 295 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 PRSS16Q9NQE7 514 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 AASDHPPTQ9NRN7 309 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 ABCB8Q9NUT2 735 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 GGA2Q9UJY4 613 aa17.97■□□□□ 0.47
CSNK1E-215ENST00000612795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 A0A1W2PPC4 97 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 YKT6O15498 198 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 ATP5BP06576 529 aaKnown RBP17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 HARS2P49590 506 aaKnown RBP17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 ZNF445P59923 1031 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 YWHAGP61981 247 aaKnown RBP eCLIP17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 CFHR1Q03591 330 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 PDE4CQ08493 712 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 RTP5Q14D33 572 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 FBXL19Q6PCT2 694 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 FGF11Q92914 225 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 MAGEF1Q9HAY2 307 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 CYP3A43Q9HB55 503 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 GDF3Q9NR23 364 aa17.96■□□□□ 0.47
CSNK1E-215ENST00000612795 CAPN8A6NHC0 703 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 J3QKU1 62 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 C7P10643 843 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 PABPC1P11940 636 aaKnown RBP17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 SYT1P21579 422 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 ACTN2P35609 894 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 ARRB1P49407 418 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 CXADRP78310 365 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 CCDC173Q0VFZ6 552 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 MBLAC2Q68D91 279 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 USP30Q70CQ3 517 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 ADIPOR2Q86V24 386 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 SAP25Q8TEE9 199 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 TMEM176AQ96HP8 235 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 PABPC3Q9H361 631 aaKnown RBP17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 FBXL12Q9NXK8 326 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 SUN2Q9UH99 717 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 SCML1Q9UN30 329 aa17.95■□□□□ 0.46
CSNK1E-215ENST00000612795 SPTLC2O15270 562 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 BRINP1O60477 761 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 DLDP09622 509 aaKnown RBP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 CD38P28907 300 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 EPHA8P29322 1005 aaPredicted RBP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 SFSWAPQ12872 951 aaKnown RBP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 ZNF394Q53GI3 561 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 TAF1BQ53T94 588 aaPredicted RBP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 CEP135Q66GS9 1140 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 NCEH1Q6PIU2 408 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 FMNL3Q8IVF7 1028 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 CCDC150Q8NCX0 1101 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 TMC2Q8TDI7 906 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 TMA16Q96EY4 203 aaKnown RBP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 NIF3L1Q9GZT8 377 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 OLA1Q9NTK5 396 aaKnown RBP17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 COL6A6A6NMZ7 2263 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 TENM4Q6N022 2769 aa17.94■□□□□ 0.46
CSNK1E-215ENST00000612795 ARID1BQ8NFD5 2236 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 PVALEFA0A1B0GWK0 134 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 LRRC72A6NJI9 287 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 IKBKBO14920 756 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 RNASEH1O60930 286 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 WNT1P04628 370 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 POLR2EP19388 210 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 SLC8A3P57103 927 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 TLE3Q04726 772 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 TRIP4Q15650 581 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 PIGZQ86VD9 579 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 SLC9A9Q8IVB4 645 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 LINC00301Q8NCQ3 95 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 HEXIM2Q96MH2 286 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms