RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SLITRK6Q9H5Y7 841 aa18.15■□□□□ 0.5
SREK1-216ENST00000612404 RCOR3Q9P2K3 495 aaPredicted RBP18.15■□□□□ 0.5
SREK1-216ENST00000612404 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.15■□□□□ 0.5
SREK1-216ENST00000612404 HS3ST4Q9Y661 456 aa18.15■□□□□ 0.5
SREK1-216ENST00000612404 V9GYY5 206 aaPredicted RBP18.15■□□□□ 0.5
SREK1-216ENST00000612404 TRAV19A0A0A6YYK7 116 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 ZNF487B1APH4 448 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 POU2F2P09086 479 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 GRIN2CQ14957 1233 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 TEAD2Q15562 447 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 RARS2Q5T160 578 aaKnown RBP18.14■□□□□ 0.5
SREK1-216ENST00000612404 BBS12Q6ZW61 710 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 EFHBQ8N7U6 833 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 C1orf54Q8WWF1 131 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 ATG4AQ8WYN0 398 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 PLD4Q96BZ4 506 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 FAF2Q96CS3 445 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 KRT12Q99456 494 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 KLF16Q9BXK1 252 aaPredicted RBP18.14■□□□□ 0.5
SREK1-216ENST00000612404 DDX47Q9H0S4 455 aaKnown RBP18.14■□□□□ 0.5
SREK1-216ENST00000612404 R3HDM2Q9Y2K5 976 aaKnown RBP18.14■□□□□ 0.5
SREK1-216ENST00000612404 CPQQ9Y646 472 aa18.14■□□□□ 0.5
SREK1-216ENST00000612404 C5orf42Q9H799 3197 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 EFCAB8A8MWE9 144 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 CCDC188H7C350 402 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 APOL1O14791 398 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 LRIG2O94898 1065 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 GLP2RO95838 553 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 AMPD1P23109 780 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 SEMA3BQ13214 749 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 PIK3R6Q5UE93 754 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 RWDD4Q6NW29 188 aaKnown RBP18.14■□□□□ 0.49
SREK1-216ENST00000612404 RFX8Q6ZV50 586 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 PQLC3Q8N755 202 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 SLC46A2Q9BY10 475 aa18.14■□□□□ 0.49
SREK1-216ENST00000612404 SAE1Q9UBE0 346 aaPredicted RBP18.14■□□□□ 0.49
SREK1-216ENST00000612404 ZNF197O14709 1029 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 STC2O76061 302 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 OLFM2O95897 454 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 SNX1Q13596 522 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 MYRIPQ8NFW9 859 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 MAGOHBQ96A72 148 aaKnown RBP18.13■□□□□ 0.49
SREK1-216ENST00000612404 ARHGEF4Q9NR80 690 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 LMCD1Q9NZU5 365 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 MRPS23Q9Y3D9 190 aaKnown RBP18.13■□□□□ 0.49
SREK1-216ENST00000612404 NOTCH4Q99466 2003 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 XIRP2A4UGR9 3374 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 PHF2O75151 1096 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 MOSPD3O75425 235 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 EPHB2P29323 1055 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 CORO1AP31146 461 aaKnown RBP18.13■□□□□ 0.49
SREK1-216ENST00000612404 ZNF135P52742 658 aaPredicted RBP18.13■□□□□ 0.49
SREK1-216ENST00000612404 MLLT6P55198 1093 aaPredicted RBP18.13■□□□□ 0.49
SREK1-216ENST00000612404 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 PRSS36Q5K4E3 855 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 C1orf228Q6PIY5 440 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 DENND1CQ8IV53 801 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 ING5Q8WYH8 240 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 ZFRQ96KR1 1074 aaKnown RBP18.13■□□□□ 0.49
SREK1-216ENST00000612404 C1orf74Q96LT6 269 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 STIM2Q9P246 746 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 HEY1Q9Y5J3 304 aa18.13■□□□□ 0.49
SREK1-216ENST00000612404 DDX6P26196 483 aaKnown RBP eCLIP18.12■□□□□ 0.49
SREK1-216ENST00000612404 AVPR1AP37288 418 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 SLC11A2P49281 568 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 RAP1GAP2Q684P5 730 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 SLC9A4Q6AI14 798 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 NPNTQ6UXI9 565 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 PLD5Q8N7P1 536 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 UBXN4Q92575 508 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 FAM161BQ96MY7 647 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 DCLK3Q9C098 648 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 SMG9Q9H0W8 520 aaKnown RBP18.12■□□□□ 0.49
SREK1-216ENST00000612404 HOMER3Q9NSC5 361 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 ETNK2Q9NVF9 386 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 VANGL2Q9ULK5 521 aa18.12■□□□□ 0.49
SREK1-216ENST00000612404 E9PAM4 449 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 APOC4-APOC2K7ER74 178 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 APOC2P02655 101 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 PECAM1P16284 738 aaPredicted RBP18.11■□□□□ 0.49
SREK1-216ENST00000612404 ZFXP17010 805 aaPredicted RBP18.11■□□□□ 0.49
SREK1-216ENST00000612404 IGFBP4P22692 258 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 HCAR3P49019 387 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 SLC7A9P82251 487 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 MRPS25P82663 173 aaKnown RBP18.11■□□□□ 0.49
SREK1-216ENST00000612404 MTA1Q13330 715 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 DPYSQ14117 519 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 LRRC31Q6UY01 552 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 TMEM184AQ6ZMB5 413 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 EP400NLQ6ZTU2 488 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 C14orf80Q86SX3 495 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 CHSY1Q86X52 802 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 CMTM8Q8IZV2 173 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 MMGT1Q8N4V1 131 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 TTC13Q8NBP0 860 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 P3H4Q92791 437 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 WBP2Q969T9 261 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 TASP1Q9H6P5 420 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 MFHAS1Q9Y4C4 1052 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms