RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 PNPLA3Q9NST1 481 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 IKZF3Q9UKT9 509 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 FAM50BQ9Y247 325 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 GMPPBQ9Y5P6 360 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 LYVE1Q9Y5Y7 322 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ASB14A6NK59 587 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 FXR1P51114 621 aaKnown RBP eCLIP12.67□□□□□ -0.38
HLCS-207ENST00000612277 AP1S1P61966 158 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 VPS72Q15906 364 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ANKRD26P1Q6NSI1 321 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 FRMD7Q6ZUT3 714 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 R3HCC1LQ7Z5L2 792 aaKnown RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 BLOC1S5Q8TDH9 187 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ZSWIM1Q9BR11 485 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 TMEM260Q9NX78 707 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 G3V2T6 193 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 KMOO15229 486 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 SNAP91O60641 907 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 EYA4O95677 639 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ATP2C1P98194 919 aaPredicted RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 MTSS1LQ765P7 747 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 FBXW8Q8N3Y1 598 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 SFRP1Q8N474 314 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 TPCN2Q8NHX9 752 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 SYN2Q92777 582 aaPredicted RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 CAVIN3Q969G5 261 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 TRIT1Q9H3H1 467 aaKnown RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 AGAP1Q9UPQ3 857 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 PCDHGA10Q9Y5H3 936 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 A2MP01023 1474 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 USP17L5A8MUK1 530 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 THRBP10828 461 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ITIH1P19827 911 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 S100A12P80511 92 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 MRPS22P82650 360 aaKnown RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 TNK2Q07912 1038 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 GNA13Q14344 377 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 GALNT3Q14435 633 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 CWF19L1Q69YN2 538 aaKnown RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 DEPDC4Q8N2C3 294 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 AHSPQ9NZD4 102 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 FEM1BQ9UK73 627 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
HLCS-207ENST00000612277 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.67□□□□□ -0.38
HLCS-207ENST00000612277 TMCO1Q9UM00 188 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 ACOT9Q9Y305 439 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
HLCS-207ENST00000612277 RLN1P04808 185 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 CSHL1Q14406 222 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 MED28Q9H204 178 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 THAP1Q9NVV9 213 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 FAM172BPA6NC97 362 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 H3BQF6 201 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 NR3C2P08235 984 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 IST1P53990 364 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 FUKQ8N0W3 1084 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 XPR1Q9UBH6 696 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 PP2D1A8MPX8 630 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 PLA2G6O60733 806 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 GRAP2O75791 330 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 PDGFRBP09619 1106 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 MYL4P12829 197 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ARL3P36405 182 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ALDH9A1P49189 494 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 GALK1P51570 392 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ACAP2Q15057 778 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ZMYND11Q15326 602 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 FAXCQ5TGI0 409 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 DSG4Q86SJ6 1040 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 SLCO6A1Q86UG4 719 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
HLCS-207ENST00000612277 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 SPAG16Q8N0X2 631 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 OR8H3Q8N146 312 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ZNF615Q8N8J6 731 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 FNDC5Q8NAU1 212 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 TDRD1Q9BXT4 1180 aaKnown RBP12.66□□□□□ -0.38
HLCS-207ENST00000612277 GJB4Q9NTQ9 266 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 EDC4Q6P2E9 1401 aaKnown RBP12.66□□□□□ -0.38
HLCS-207ENST00000612277 ATXN2Q99700 1313 aaKnown RBP12.66□□□□□ -0.38
HLCS-207ENST00000612277 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 PMPCBO75439 489 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 PRKCBP05771 671 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 ENO2P09104 434 aaPredicted RBP12.66□□□□□ -0.38
HLCS-207ENST00000612277 H2AFXP16104 143 aaPredicted RBP12.66□□□□□ -0.38
HLCS-207ENST00000612277 RCAN1P53805 252 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 NCOA4Q13772 614 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 FICDQ9BVA6 458 aa12.66□□□□□ -0.38
HLCS-207ENST00000612277 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.66□□□□□ -0.38
HLCS-207ENST00000612277 DNAJC11Q9NVH1 559 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms