RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 FAM72CH0Y354 149 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TGM5O43548 720 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 LIASO43766 372 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CREB3O43889 395 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 MOCS2O96007 188 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 F9P00740 461 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ADH1AP07327 375 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ZDHHC11BP0C7U3 371 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CSH1P0DML2 217 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CSH2P0DML3 217 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 H2AFXP16104 143 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 HMGA1P17096 107 aaKnown RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 GOT1P17174 413 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 AMPD1P23109 780 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 IL4RP24394 825 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 KLRC2P26717 231 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 GBP1P32455 592 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ADRA1BP35368 520 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 IRS1P35568 1242 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 FNTAP49354 379 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 DR1Q01658 176 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 OTUD4Q01804 1114 aaKnown RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 SCAPQ12770 1279 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 COL19A1Q14993 1142 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TRADDQ15628 312 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CCNG2Q16589 344 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 C10orf120Q5SQS8 335 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 FAM72AQ5TYM5 149 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 FAM72DQ6L9T8 149 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 C1orf228Q6PIY5 440 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CCDC137Q6PK04 289 aaKnown RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 B4GALNT4Q76KP1 1039 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 FAM72BQ86X60 149 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 DDX42Q86XP3 938 aaKnown RBP eCLIP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 JAMLQ86YT9 394 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 MAP7D3Q8IWC1 876 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CCDC105Q8IYK2 499 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TCEAL8Q8IYN2 117 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CCDC26Q8TAB7 109 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 FAM71BQ8TC56 605 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ACTL9Q8TC94 416 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CASKIN2Q8WXE0 1202 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 HLA-CQ95604 372 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 NTAN1Q96AB6 310 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 FAF2Q96CS3 445 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CCDC114Q96M63 670 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CSPG4P5Q96PW8 444 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 RNF157Q96PX1 679 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ZNF670Q9BS34 389 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 MAK16Q9BXY0 300 aaKnown RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TRIM31Q9BZY9 425 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TKTL2Q9H0I9 626 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 WDCPQ9H6R7 721 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 LRRC19Q9H756 370 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CCSER2Q9H7U1 834 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 C10orf88Q9H8K7 445 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 EPB41L5Q9HCM4 733 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ZNF334Q9HCZ1 680 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 TLR9Q9NR96 1032 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 ETNK2Q9NVF9 386 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 CWC15Q9P013 229 aaKnown RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 HSFX1Q9UBD0 423 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 STK39Q9UEW8 545 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 PCYOX1Q9UHG3 505 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 RASAL2Q9UJF2 1139 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 RAB21Q9UL25 225 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 DNPEPQ9ULA0 475 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 LZTS1Q9Y250 596 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 EFR3BQ9Y2G0 817 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 RWDD3Q9Y3V2 267 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 BRWD1Q9NSI6 2320 aa8.38□□□□□ -1.07
TARDBP-213ENST00000611963 C2orf16Q68DN1 1984 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 NYNRINQ9P2P1 1898 aaKnown RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 SLC12A8A0AV02 714 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 FAM187AA6NFU0 413 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 H3BRJ5 948 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 EEF2KO00418 725 aaKnown RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 APOL1O14791 398 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 TLR5O60602 858 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 HMBSP08397 361 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 MYBL2P10244 700 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 ARL4AP40617 200 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 CARSP49589 748 aaKnown RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 EPHB3P54753 998 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 TBX4P57082 545 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 EIF4EBP2Q13542 120 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 DHX34Q14147 1143 aaKnown RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 TFDP2Q14188 446 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 VEPH1Q14D04 833 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 TRIP13Q15645 432 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-213ENST00000611963 TAF12Q16514 161 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 TCEAL5Q5H9L2 206 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 WDR93Q6P2C0 686 aa8.37□□□□□ -1.07
TARDBP-213ENST00000611963 LILRA6Q6PI73 481 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms