RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 DDX3YO15523 660 aaKnown RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 FTLP02792 175 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 UNGP13051 313 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 GABRB2P47870 512 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 DNA2P51530 1060 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 SLC7A5Q01650 507 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 EFEMP1Q12805 493 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 MLF2Q15773 248 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 EML3Q32P44 896 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 EFHC1Q5JVL4 640 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 NAA35Q5VZE5 725 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 OR6B2Q6IFH4 312 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 C11orf63Q6NUN7 778 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 PPP1R2P3Q6NXS1 205 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 MSANTD2Q6P1R3 559 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 C1orf228Q6PIY5 440 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 HFE2Q6ZVN8 426 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 EIF1ADQ8N9N8 165 aaKnown RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 TTC16Q8NEE8 873 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 FAM71BQ8TC56 605 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 C18orf8Q96DM3 657 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 ZFYVE19Q96K21 471 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 KRT12Q99456 494 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 C8orf33Q9H7E9 229 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 POPDC2Q9HBU9 364 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 LSM7Q9UK45 103 aaKnown RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 CA14Q9ULX7 337 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 ZNF510Q9Y2H8 683 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 HBS1LQ9Y450 684 aaKnown RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 SLC12A8A0AV02 714 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 KRBA1A5PL33 1030 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 PRR33A8MZF0 331 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 CCDC188H7C350 402 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 MAN2B1O00754 1011 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 CAPN9O14815 690 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 CEP104O60308 925 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 HSF2BPO75031 334 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 NFATC1O95644 943 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 ERBB2P04626 1255 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 NCAM1P13591 858 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 ABCB4P21439 1286 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 SCNN1AP37088 669 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 TNNT3P45378 269 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 KPNA1P52294 538 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 STARD6P59095 220 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 YWHAZP63104 245 aaKnown RBP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 SLC6A3Q01959 620 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 NR1H3Q13133 447 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 RUNX3Q13761 415 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 ITPRIPL2Q3MIP1 535 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 TMEM31Q5JXX7 168 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 OLFML1Q6UWY5 402 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 FAM183BPQ6ZVS7 135 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 HTR3DQ70Z44 454 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 SLC26A9Q7LBE3 791 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 MIB1Q86YT6 1006 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 GSPT2Q8IYD1 628 aaKnown RBP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 SIX5Q8N196 739 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 CPA5Q8WXQ8 436 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 EDEM1Q92611 657 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 ATP2A3Q93084 1043 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 PBXIP1Q96AQ6 731 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 PLD4Q96BZ4 506 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 DCLK3Q9C098 648 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 CARD9Q9H257 536 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 MFSD1Q9H3U5 465 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 EBF3Q9H4W6 596 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 HPS4Q9NQG7 708 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 HEBP1Q9NRV9 189 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 SEPT11Q9NVA2 429 aaKnown RBP9.17□□□□□ -0.94
SMAD4-217ENST00000611848 PSD3Q9NYI0 1048 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 GTSE1Q9NYZ3 720 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 TJP2Q9UDY2 1190 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 COL4A2P08572 1712 aa9.17□□□□□ -0.94
SMAD4-217ENST00000611848 AGPSO00116 658 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 RAD51CO43502 376 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 STC2O76061 302 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CYP1A2P05177 515 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 FYNP06241 537 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 IRF1P10914 325 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MMP8P22894 467 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 NSFP46459 744 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MRPS25P82663 173 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CENPCQ03188 943 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TNK2Q07912 1038 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CLEC16AQ2KHT3 1053 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 HSP90B2PQ58FF3 399 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TRIM68Q6AZZ1 485 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ZNF852Q6ZMS4 543 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TPRG1Q6ZUI0 275 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 RALGPS2Q86X27 583 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ADGRG2Q8IZP9 1017 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CPA6Q8N4T0 437 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 SERPINB11Q96P15 392 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 NELL2Q99435 816 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 DDX23Q9BUQ8 820 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms