RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 HTR3DQ70Z44 454 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 NPAS3Q8IXF0 933 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 KCTD6Q8NC69 237 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 HSPH1Q92598 858 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 FGF13Q92913 245 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 USP13Q92995 863 aaPredicted RBP16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 HLA-CQ95604 372 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 TUBB2BQ9BVA1 445 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 DHX35Q9H5Z1 703 aaKnown RBP16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 TRPV4Q9HBA0 871 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 PCDH18Q9HCL0 1135 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 TMPRSS4Q9NRS4 437 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 TDP1Q9NUW8 608 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 GPATCH2LQ9NWQ4 482 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 RCOR3Q9P2K3 495 aaPredicted RBP16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 CDH22Q9UJ99 828 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 CDH7Q9ULB5 785 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 ZNF510Q9Y2H8 683 aa16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 ARIH1Q9Y4X5 557 aaPredicted RBP16.54■□□□□ 0.24
CLTCL1-207ENST00000611723 LEFTY2O00292 366 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ACSL4O60488 711 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 KLKB1P03952 638 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 HMBSP08397 361 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 IL4RP24394 825 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 HTR7P34969 479 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 PTPN7P35236 360 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 GJC1P36383 396 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 HCAR3P49019 387 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 CDH6P55285 790 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 PPP2R5EQ16537 467 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ARTNQ5T4W7 220 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 Q6ZNB5 142 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ALYREFQ86V81 257 aaKnown RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ARID3BQ8IVW6 561 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 RASGEF1CQ8N431 466 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ING5Q8WYH8 240 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 TSC1Q92574 1164 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ZNF592Q92610 1267 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 WBP2Q969T9 261 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 FAF2Q96CS3 445 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 KCTD15Q96SI1 283 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 MAGEB5Q9BZ81 275 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 SLITRK6Q9H5Y7 841 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 SMPD4Q9NXE4 827 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 OR12D3Q9UGF7 316 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 TTC7AQ9ULT0 858 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 EFR3BQ9Y2G0 817 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 HS3ST4Q9Y661 456 aa16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 ZFP37Q9Y6Q3 630 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-207ENST00000611723 E2F8A0AVK6 867 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 GPR37L1O60883 481 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 KRT1P04264 644 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 CORO1AP31146 461 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 CETN2P41208 172 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 SLC11A2P49281 568 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 DNA2P51530 1060 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 DPYSL3Q14195 570 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 MS4A13Q5J8X5 152 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 PIK3R6Q5UE93 754 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 MFSD7Q6UXD7 560 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 SPOCD1Q6ZMY3 1216 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 FAM217AQ8IXS0 508 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 PYROXD2Q8N2H3 581 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 CELF5Q8N6W0 485 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 ZSCAN18Q8TBC5 510 aaPredicted RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 SH3RF2Q8TEC5 729 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 COG1Q8WTW3 980 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 SMARCD2Q92925 531 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 RNF25Q96BH1 459 aaPredicted RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 ACSF2Q96CM8 615 aaPredicted RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 ASB16Q96NS5 453 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 PRMT1Q99873 361 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 ZNF670Q9BS34 389 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 PRDM16Q9HAZ2 1276 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 OBP2AQ9NY56 170 aa16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 XPO7Q9UIA9 1087 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 AGO1Q9UL18 857 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 USP15Q9Y4E8 981 aaPredicted RBP16.52■□□□□ 0.24
CLTCL1-207ENST00000611723 DOCK8Q8NF50 2099 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 LRRD1A4D1F6 860 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 PI4K2BG5E9Z4 385 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CD48P09326 243 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 HOXC13P31276 330 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CXCR5P32302 372 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CDKN2BP42772 138 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ZNF211Q13398 564 aaPredicted RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 SMAD4Q13485 552 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 KRT81Q14533 505 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ZNF77Q15935 545 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 C5orf22Q49AR2 442 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ODF2Q5BJF6 829 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ZFYVE27Q5T4F4 411 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ADGRF1Q5T601 910 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms