RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 TMEM139Q8IV31 216 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 FMNL3Q8IVF7 1028 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 CPXM2Q8N436 756 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 DDI1Q8WTU0 396 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 KCTD13Q8WZ19 329 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 PCDHB4Q9Y5E5 795 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 STON1Q9Y6Q2 735 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 CEP192Q8TEP8 1941 aa22.69■■□□□ 1.22
CBWD3-207ENST00000611426 ATXN2Q99700 1313 aaKnown RBP22.68■■□□□ 1.22
CBWD3-207ENST00000611426 GTPBP10A4D1E9 387 aaKnown RBP22.68■■□□□ 1.22
CBWD3-207ENST00000611426 YJEFN3A6XGL0 299 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 E7ENQ6 273 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 CDX4O14627 284 aaPredicted RBP22.68■■□□□ 1.22
CBWD3-207ENST00000611426 PMM2O15305 246 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 PAEPP09466 180 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 SETSIPP0DME0 302 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 SKILP12757 684 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 HARS2P49590 506 aaKnown RBP22.68■■□□□ 1.22
CBWD3-207ENST00000611426 SYCP1Q15431 976 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 LCLAT1Q6UWP7 414 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 PPM1KQ8N3J5 372 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 UCMAQ8WVF2 138 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 EDEM1Q92611 657 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 SFMBT1Q9UHJ3 866 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 PILRBQ9UKJ0 227 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 PYCARDQ9ULZ3 195 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 CAPN11Q9UMQ6 739 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 CYP8B1Q9UNU6 501 aa22.68■■□□□ 1.22
CBWD3-207ENST00000611426 TNRC6BQ9UPQ9 1833 aaKnown RBP22.68■■□□□ 1.22
CBWD3-207ENST00000611426 IGHV1OR15-9A0A0B4J2B8 117 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 NPC1O15118 1278 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 LCP1P13796 627 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 NOVA1P51513 510 aaKnown RBP22.67■■□□□ 1.22
CBWD3-207ENST00000611426 TRIP4Q15650 581 aaPredicted RBP22.67■■□□□ 1.22
CBWD3-207ENST00000611426 UAP1L1Q3KQV9 507 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 TFAP2BQ92481 460 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 MRGPRX1Q96LB2 322 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 NAA15Q9BXJ9 866 aaKnown RBP22.67■■□□□ 1.22
CBWD3-207ENST00000611426 SLC6A17Q9H1V8 727 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 CNGB3Q9NQW8 809 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 ABCC13Q9NSE7 274 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 HBS1LQ9Y450 684 aaKnown RBP22.67■■□□□ 1.22
CBWD3-207ENST00000611426 PI4KAP42356 2102 aa22.67■■□□□ 1.22
CBWD3-207ENST00000611426 ZNF33AQ06730 810 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 STARD3Q14849 445 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 PKDCCQ504Y2 493 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 SLC23A3Q6PIS1 610 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 KIAA1324Q6UXG2 1013 aaKnown RBP22.66■■□□□ 1.22
CBWD3-207ENST00000611426 ANKS1BQ7Z6G8 1248 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 FAM217AQ8IXS0 508 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 PIWIL1Q96J94 861 aaKnown RBP22.66■■□□□ 1.22
CBWD3-207ENST00000611426 SLC2A11Q9BYW1 496 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 SPTLC3Q9NUV7 552 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 THAP10Q9P2Z0 257 aaPredicted RBP22.66■■□□□ 1.22
CBWD3-207ENST00000611426 ANGPTL2Q9UKU9 493 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 CLEC4EQ9ULY5 219 aa22.66■■□□□ 1.22
CBWD3-207ENST00000611426 RNF225M0QZC1 329 aaPredicted RBP22.65■■□□□ 1.22
CBWD3-207ENST00000611426 P4HA2O15460 535 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 AFPP02771 609 aaKnown RBP22.65■■□□□ 1.22
CBWD3-207ENST00000611426 CFIP05156 583 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 PMLP29590 882 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 CASP14P31944 242 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 HOXD12P35452 270 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 RGS7P49802 495 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 DAOAP59103 153 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 KCNH2Q12809 1159 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 E2F5Q15329 346 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 CNGA2Q16280 664 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 MPPE1Q53F39 396 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 PEAR1Q5VY43 1037 aaPredicted RBP22.65■■□□□ 1.22
CBWD3-207ENST00000611426 CEP76Q8TAP6 659 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 SLC35F5Q8WV83 523 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 KAT5Q92993 513 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 DNAJC7Q99615 494 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 ELOVL2Q9NXB9 296 aa22.65■■□□□ 1.22
CBWD3-207ENST00000611426 PIK3R2O00459 728 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 PES1O00541 588 aaKnown RBP22.64■■□□□ 1.22
CBWD3-207ENST00000611426 TSPAN3O60637 253 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 NDUFS2O75306 463 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 ENGP17813 658 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 IL12RB1P42701 662 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 MAPK8P45983 427 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 ZNF132P52740 706 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 STILQ15468 1287 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 DUOXA1Q1HG43 343 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 FUT11Q495W5 492 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 SH3PXD2AQ5TCZ1 1133 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 PMF1Q6P1K2 205 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 RRAGAQ7L523 313 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 SCML4Q8N228 414 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 LMO3Q8TAP4 145 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 CIPCQ9C0C6 399 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 SLC6A14Q9UN76 642 aa22.64■■□□□ 1.22
CBWD3-207ENST00000611426 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.64■■□□□ 1.22
CBWD3-207ENST00000611426 M0QYV0 167 aa22.63■■□□□ 1.21
CBWD3-207ENST00000611426 GIPC1O14908 333 aa22.63■■□□□ 1.21
CBWD3-207ENST00000611426 ARHGAP6O43182 974 aa22.63■■□□□ 1.21
CBWD3-207ENST00000611426 TIMM44O43615 452 aa22.63■■□□□ 1.21
CBWD3-207ENST00000611426 SYNCRIPO60506 623 aaKnown RBP22.63■■□□□ 1.21
CBWD3-207ENST00000611426 BRD2P25440 801 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms