RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 TMEM184AQ6ZMB5 413 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 ZNF683Q8IZ20 524 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 ELMOD1Q8N336 334 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 RIN3Q8TB24 985 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 ITFG1Q8TB96 612 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
CTCFL-221ENST00000608903 RNF34Q969K3 372 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 RBM41Q96IZ5 413 aaKnown RBP11.97□□□□□ -0.49
CTCFL-221ENST00000608903 RPGRIP1Q96KN7 1286 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 ZSWIM3Q96MP5 696 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 CALN1Q9BXU9 219 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 SMG9Q9H0W8 520 aaKnown RBP11.97□□□□□ -0.49
CTCFL-221ENST00000608903 SMPD4Q9NXE4 827 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-221ENST00000608903 SAE1Q9UBE0 346 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-221ENST00000608903 HS3ST4Q9Y661 456 aa11.97□□□□□ -0.49
CTCFL-221ENST00000608903 SCAMP3O14828 347 aaKnown RBP11.96□□□□□ -0.49
CTCFL-221ENST00000608903 STC2O76061 302 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 POU2F2P09086 479 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 DESP17661 470 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 IRAK1P51617 712 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 COPS2P61201 443 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 NNTQ13423 1086 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 ADAM15Q13444 863 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 KRT81Q14533 505 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 PDK2Q15119 407 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 ANKRD20A8PQ5CZ79 823 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 TFDP3Q5H9I0 405 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 BRMS1LQ5PSV4 323 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.49
CTCFL-221ENST00000608903 WDR93Q6P2C0 686 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 NPNTQ6UXI9 565 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 SND1Q7KZF4 910 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTCFL-221ENST00000608903 PSTKQ8IV42 348 aaKnown RBP11.96□□□□□ -0.49
CTCFL-221ENST00000608903 EFHBQ8N7U6 833 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 NETO2Q8NC67 525 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 CSPG4P5Q96PW8 444 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 RNF157Q96PX1 679 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 CDCA3Q99618 268 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-221ENST00000608903 HINFPQ9BQA5 517 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 SIK2Q9H0K1 926 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTCFL-221ENST00000608903 CLEC1BQ9P126 229 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 RNF14Q9UBS8 474 aa11.96□□□□□ -0.49
CTCFL-221ENST00000608903 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.5
CTCFL-221ENST00000608903 HDCP19113 662 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 EFHC2Q5JST6 749 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 FAM182AQ5T1J6 154 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 CCDC181Q5TID7 509 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 MANEALQ5VSG8 457 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 TTC27Q6P3X3 843 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 C1orf54Q8WWF1 131 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 ATG4AQ8WYN0 398 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 SMG7Q92540 1137 aaKnown RBP11.96□□□□□ -0.5
CTCFL-221ENST00000608903 P2RY11Q96G91 374 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 FAM161BQ96MY7 647 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 HAPLN3Q96S86 360 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 PRMT1Q99873 361 aaKnown RBP11.96□□□□□ -0.5
CTCFL-221ENST00000608903 OSBPL2Q9H1P3 480 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 OR12D3Q9UGF7 316 aa11.96□□□□□ -0.5
CTCFL-221ENST00000608903 HBS1LQ9Y450 684 aaKnown RBP11.96□□□□□ -0.5
CTCFL-221ENST00000608903 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 KRIT1O00522 736 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CREB3O43889 395 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CST8O60676 142 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 XYLBO75191 536 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 LRIG2O94898 1065 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 IRF1P10914 325 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 MBL2P11226 248 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 PECAM1P16284 738 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CEBPBP17676 345 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CDC25CP30307 473 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 PAFAH1B1P43034 410 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 AIF1P55008 147 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 MLLT6P55198 1093 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 DYNLT1P63172 113 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 ITIH3Q06033 890 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 RING1Q06587 406 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 SLC10A2Q12908 348 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 DPYSQ14117 519 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CBX2Q14781 532 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 MS4A13Q5J8X5 152 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 GPR158Q5T848 1215 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 ANKRD54Q6NXT1 300 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 BBS12Q6ZW61 710 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 PDZD4Q76G19 769 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 TP53INP2Q8IXH6 220 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 PLD5Q8N7P1 536 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 ING5Q8WYH8 240 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 MRPS31Q92665 395 aaKnown RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 HAUS1Q96CS2 278 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CDK5RAP1Q96SZ6 601 aaKnown RBP11.95□□□□□ -0.5
CTCFL-221ENST00000608903 ZNF670Q9BS34 389 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 LRRC1Q9BTT6 524 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CCL26Q9Y258 94 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 CPQQ9Y646 472 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 TBX10O75333 385 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 MYBL2P10244 700 aa11.95□□□□□ -0.5
CTCFL-221ENST00000608903 SLC6A4P31645 630 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms