RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 IFITM3Q01628 133 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 CHRNEQ04844 493 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 CLCQ05315 142 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 DGKDQ16760 1214 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 MSS51Q4VC12 460 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 VWA5B1Q5TIE3 1220 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 DAGLBQ8NCG7 672 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 HM13Q8TCT9 377 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 C1orf50Q9BV19 199 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 INTS2Q9H0H0 1204 aaKnown RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 NEK6Q9HC98 313 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 ANGPTL3Q9Y5C1 460 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 RGS13O14921 159 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 DCXO43602 365 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 SNAP91O60641 907 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 FAM155BO75949 473 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 NPR1P16066 1061 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CES1P23141 567 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 ETV3P41162 512 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 KRT6CP48668 564 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 RACK1P63244 317 aaKnown RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 MS4A2Q01362 244 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 GALNT2Q10471 571 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 STX3Q13277 289 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CYP4A22Q5TCH4 519 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 PALM2Q8IXS6 379 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 MTG1Q9BT17 334 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 ANO3Q9BYT9 981 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 IRF2BPLQ9H1B7 796 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 GIMAP4Q9NUV9 329 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 APEX2Q9UBZ4 518 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 ZNF229Q9UJW7 825 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 ANAPC7Q9UJX3 599 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 PPME1Q9Y570 386 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 DGKBQ9Y6T7 804 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 ASTN2O75129 1339 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 COL11A2P13942 1736 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 A0A0B4J269 797 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 A8MX80 341 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 KLF11O14901 512 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 SPAG6O75602 509 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 TOM1L1O75674 476 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 SGPL1O95470 568 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 GNAO1P09471 354 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 MSL3P1P0C860 447 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 FDX1P10109 184 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 BMP3P12645 472 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CCNA2P20248 432 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 DCKP27707 260 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 PRDX5P30044 214 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 NMT1P30419 496 aaKnown RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 FMO5P49326 533 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■□□□ 14.4
CTCFL-218ENST00000608440 TUBB3Q13509 450 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 SUZ12Q15022 739 aaKnown RBP12.9□□□□□ -0.34
CTCFL-218ENST00000608440 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 KCNT2Q6UVM3 1135 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 SLC30A10Q6XR72 485 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CATSPER3Q86XQ3 398 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 FBXO36Q8NEA4 188 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 VPS35Q96QK1 796 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CDRT15Q96T59 188 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 CIB1Q99828 191 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 FOXP3Q9BZS1 431 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 STK39Q9UEW8 545 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 DNPEPQ9ULA0 475 aa12.9□□□□□ -0.34
CTCFL-218ENST00000608440 ZNF839A8K0R7 811 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 CLPXO76031 633 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.35
CTCFL-218ENST00000608440 IL1BP01584 269 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 NUDT2P50583 147 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 RAD23AP54725 363 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 IKBKEQ14164 716 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 HIF1AQ16665 826 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 ANKRD13BQ86YJ7 626 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 TMEM102Q8N9M5 508 aaPredicted RBP12.9□□□□□ -0.35
CTCFL-218ENST00000608440 RDH13Q8NBN7 331 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF384Q8TF68 577 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 KLHL32Q96NJ5 620 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 TCF12Q99081 682 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 NANOGQ9H9S0 305 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 TRIM39Q9HCM9 518 aa12.9□□□□□ -0.35
CTCFL-218ENST00000608440 POLLQ9UGP5 575 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms