RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 AOPEPQ8N6M6 819 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 ZNF366Q8N895 744 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 CYB5D2Q8WUJ1 264 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 DDX1Q92499 740 aaKnown RBP12.77□□□□□ -0.37
CTSA-210ENST00000606000 TMA16Q96EY4 203 aaKnown RBP12.77□□□□□ -0.37
CTSA-210ENST00000606000 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 ABCB8Q9NUT2 735 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 THAP10Q9P2Z0 257 aaPredicted RBP12.77□□□□□ -0.37
CTSA-210ENST00000606000 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
CTSA-210ENST00000606000 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 MYO18AQ92614 2054 aaKnown RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 GFPT2O94808 682 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 ATP1A3P13637 1013 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 HLA-EP13747 358 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 ZNF18P17022 549 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 GGCXP38435 758 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 LMNB2Q03252 620 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 NNTQ13423 1086 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 EIF4EBP2Q13542 120 aaPredicted RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 ELF2Q15723 593 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 FUT11Q495W5 492 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 ANO6Q4KMQ2 910 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 SDE2Q6IQ49 451 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 CAVIN1Q6NZI2 390 aaKnown RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 CHST9Q7L1S5 443 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 BEND5Q7L4P6 421 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 APTXQ7Z2E3 356 aaKnown RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 ADIPOR2Q86V24 386 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 TMEFF1Q8IYR6 380 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 LOXL4Q96JB6 756 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 STK33Q9BYT3 514 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 FAM204AQ9H8W3 233 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 ELOVL2Q9NXB9 296 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 DLL3Q9NYJ7 618 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 GGA2Q9UJY4 613 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 ATXN2Q99700 1313 aaKnown RBP12.76□□□□□ -0.37
CTSA-210ENST00000606000 CKAP5Q14008 2032 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 FAM186AA6NE01 2351 aa12.76□□□□□ -0.37
CTSA-210ENST00000606000 PATE3B3GLJ2 98 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 HSF2BPO75031 334 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 LRP3O75074 770 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 DAB1O75553 588 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 RHOBTB1O94844 696 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 APOEP02649 317 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 PABPC1P11940 636 aaKnown RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 CDH5P33151 784 aaPredicted RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 PTGER3P43115 390 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 DHPSP49366 369 aaPredicted RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 JAM2P57087 298 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 ZNF445P59923 1031 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 SLC6A3Q01959 620 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 LMAN2Q12907 356 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 NME3Q13232 169 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 ENPP2Q13822 863 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 SYCP1Q15431 976 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 FSCBQ5H9T9 825 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 MS4A13Q5J8X5 152 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 RNF43Q68DV7 783 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 KIAA1324Q6UXG2 1013 aaKnown RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 CHSY1Q86X52 802 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 CIR1Q86X95 450 aaPredicted RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 MFN1Q8IWA4 741 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 LGI2Q8N0V4 545 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 GPR161Q8N6U8 529 aaKnown RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 HJURPQ8NCD3 748 aaPredicted RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 NUP205Q92621 2012 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 SPACA7Q96KW9 195 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 MRGPRX1Q96LB2 322 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 NOX5Q96PH1 765 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 PDCL3Q9H2J4 239 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
CTSA-210ENST00000606000 CYP8B1Q9UNU6 501 aa12.75□□□□□ -0.37
CTSA-210ENST00000606000 DCHS1Q96JQ0 3298 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 FRYLO94915 3013 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 BCLAF3A2AJT9 711 aaKnown RBP12.74□□□□□ -0.37
CTSA-210ENST00000606000 LGALS16A8MUM7 142 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 TACR2P21452 398 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 IRAK1P51617 712 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 BPIFB4P59827 614 aa12.74□□□□□ -0.37
CTSA-210ENST00000606000 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms