RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GSPT2Q8IYD1 628 aaKnown RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CASP10Q92851 521 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RNF34Q969K3 372 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 AZIN2Q96A70 460 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 BTN2A3PQ96KV6 586 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FCRL2Q96LA5 508 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TMEM121Q9BTD3 319 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DTLQ9NZJ0 730 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PAK5Q9P286 719 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PPARGC1AQ9UBK2 798 aaKnown RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OR12D3Q9UGF7 316 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MYO18AQ92614 2054 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 H7C0C1 242 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 I6L893 689 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TP73O15350 636 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EIF3HO15372 352 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TLL1O43897 1013 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SASH3O75995 380 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HMGA1P17096 107 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MAGEA6P43360 314 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ATP5OP48047 213 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EPHB3P54753 998 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PLTPP55058 493 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TBX4P57082 545 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PRKD1Q15139 912 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TRADDQ15628 312 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PABPC1LQ4VXU2 614 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DARS2Q6PI48 645 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TRMT10CQ7L0Y3 403 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TMCO2Q7Z6W1 182 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 UNC45BQ8IWX7 931 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZCCHC9Q8N567 271 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ADAM32Q8TC27 787 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TFB1MQ8WVM0 346 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PSMG2Q969U7 264 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HDAC11Q96DB2 347 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 VAT1Q99536 393 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TRIM31Q9BZY9 425 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NEUROG2Q9H2A3 272 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CYP4F11Q9HBI6 524 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CXXC1Q9P0U4 656 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ANAPC5Q9UJX4 755 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TPX2Q9ULW0 747 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 INSL5Q9Y5Q6 135 aa12.69□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 IGLV3-10A0A075B6K4 115 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 C5orf60A6NFR6 353 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 C2CD2LO14523 706 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TEX28O15482 410 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CREB3O43889 395 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TLR5O60602 858 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GCATO75600 419 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 STK10O94804 968 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LRIG2O94898 1065 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SEC24AO95486 1093 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LATS1O95835 1130 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM153BP0C7A2 387 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ERCC2P18074 760 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RPL17P18621 184 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 AMPD1P23109 780 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ITGA8P53708 1063 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 COG7P83436 770 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM153CQ494X1 144 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SDHAF4Q5VUM1 108 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 IZUMO3Q5VZ72 239 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HEATR6Q6AI08 1181 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LILRA6Q6PI73 481 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PPP1R21Q6ZMI0 780 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PPIL6Q8IXY8 311 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 IQCKQ8N0W5 287 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 KRT222Q8N1A0 295 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PYROXD2Q8N2H3 581 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FATE1Q969F0 183 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PLD4Q96BZ4 506 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PABPC3Q9H361 631 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ANLNQ9NQW6 1124 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TRPM5Q9NZQ8 1165 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM153AQ9UHL3 310 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DNMT3LQ9UJW3 386 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms