RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 CETN1Q12798 172 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 GOLGA7BQ2TAP0 167 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 ZNF658Q5TYW1 1059 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 TCERG1LQ5VWI1 586 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 C19orf48Q6RUI8 117 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 DBX2Q6ZNG2 339 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 KIAA0907Q7Z7F0 614 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 ZC3H3Q8IXZ2 948 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 AHI1Q8N157 1196 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 PNPLA1Q8N8W4 532 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 P2RY11Q96G91 374 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 CDC6Q99741 560 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 ARID3AQ99856 593 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 DDX50Q9BQ39 737 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 TMEM245Q9H330 911 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 ARMCX3Q9UH62 379 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 SCML1Q9UN30 329 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 ZDHHC9Q9Y397 364 aa18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 ANKRD11Q6UB99 2663 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-227ENST00000602011 LAMA5O15230 3695 aa18.58■□□□□ 0.57
SHKBP1-227ENST00000602011 KCNJ18B7U540 433 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 CD19P15391 556 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 HOXD9P28356 352 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 SLC11A2P49281 568 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 AFF3P51826 1226 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 TEAD4Q15561 434 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 NUGGCQ68CJ6 796 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 LCLAT1Q6UWP7 414 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 MIR1-1HGQ9H1L0 117 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 ITPR1Q14643 2758 aa18.58■□□□□ 0.56
SHKBP1-227ENST00000602011 CAPNS1P04632 268 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 DLDP09622 509 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 PRCPP42785 496 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 STIM1Q13586 685 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 ACAP1Q15027 740 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 CNGA2Q16280 664 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 CBWD6Q4V339 395 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 DCAF17Q5H9S7 520 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 CBWD3Q5JTY5 395 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 CBWD5Q5RIA9 395 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 TMEM215Q68D42 235 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 MSANTD2Q6P1R3 559 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 BHLHA9Q7RTU4 235 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 ZCCHC9Q8N567 271 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 C1orf216Q8TAB5 229 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 HSFY1Q96LI6 401 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 LHX5Q9H2C1 402 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 GAREM1Q9H706 876 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 TM7SF3Q9NS93 570 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 CLEC4EQ9ULY5 219 aa18.57■□□□□ 0.56
SHKBP1-227ENST00000602011 GOLGA6L4A6NEF3 574 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 O00370 1275 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 FLRT2O43155 660 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 DFNA5O60443 496 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 CBFA2T3O75081 653 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 FBXO21O94952 628 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 FTH1P19P0C7X4 201 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 PRKCHP24723 683 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 HLA-FP30511 346 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 ADIGQ0VDE8 80 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 SCAPQ12770 1279 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 PKDCCQ504Y2 493 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 FNDC3BQ53EP0 1204 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 CHST9Q7L1S5 443 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 CCDC117Q8IWD4 279 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 KDM1BQ8NB78 822 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 ENGASEQ8NFI3 743 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 SLC35F5Q8WV83 523 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 BTBD1Q9H0C5 482 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 SGK2Q9HBY8 427 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 GGA2Q9UJY4 613 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 PCOLCE2Q9UKZ9 415 aa18.56■□□□□ 0.56
SHKBP1-227ENST00000602011 TYW5A2RUC4 315 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 YJEFN3A6XGL0 299 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 E7ENQ6 273 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 P4HA2O15460 535 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 SART1O43290 800 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 DNTTP04053 509 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 PABPC1P11940 636 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 POLR2EP19388 210 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 DAOAP59103 153 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 HLA-BQ31612 363 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 TTC31Q49AM3 519 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 ADIPOR2Q86V24 386 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 PROSER1Q86XN7 944 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 SPATA20Q8TB22 786 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 SETD7Q8WTS6 366 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 EEF2KMTQ96G04 330 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 TRIM62Q9BVG3 475 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 GOLPH3LQ9H4A5 285 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 SFMBT1Q9UHJ3 866 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 EIF2B4Q9UI10 523 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 TPX2Q9ULW0 747 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 NCKAP1Q9Y2A7 1128 aa18.55■□□□□ 0.56
SHKBP1-227ENST00000602011 TULP2O00295 520 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 ASLP04424 464 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 GRIA4P48058 902 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms