RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 LUZP1Q86V48 1076 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 PHF13Q86YI8 300 aaPredicted RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 DEFB106AQ8N104 65 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 ALLCQ8N6M5 410 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 NEK11Q8NG66 645 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 WFDC5Q8TCV5 224 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 RUBCNQ92622 972 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 CENPIQ92674 756 aaPredicted RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 FAM149B1Q96BN6 582 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 BTN2A3PQ96KV6 586 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 XPO6Q96QU8 1125 aaKnown RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 ARHGEF38Q9NXL2 777 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 PLK2Q9NYY3 685 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 XPO7Q9UIA9 1087 aaKnown RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 SLC8A2Q9UPR5 921 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 RALGAPA1Q6GYQ0 2036 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 CEP192Q8TEP8 1941 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 NYNRINQ9P2P1 1898 aaKnown RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 CACNA1EQ15878 2313 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 A0A1W2PQJ5 194 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 NPC1O15118 1278 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 FLT3P36888 993 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 PI4KAP42356 2102 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 SLC11A2P49281 568 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 DGKEP52429 567 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 SNX16P57768 344 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 FANCCQ00597 558 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 KDSRQ06136 332 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 EIF4HQ15056 248 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 C2orf27AQ580R0 203 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 DCAF6Q58WW2 860 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 EGFLAMQ63HQ2 1017 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 HEATR6Q6AI08 1181 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 MON1BQ7L1V2 547 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ADIPOR2Q86V24 386 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ERICH1Q86X53 443 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 DCLK2Q8N568 766 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 FIBINQ8TAL6 211 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ADAM32Q8TC27 787 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 CPA5Q8WXQ8 436 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 GOLGA1Q92805 767 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 TMA16Q96EY4 203 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 MYO19Q96H55 970 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ZC3H10Q96K80 434 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 SPAG5Q96R06 1193 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ACOX2Q99424 681 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ANLNQ9NQW6 1124 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 PIGVQ9NUD9 493 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 THAP10Q9P2Z0 257 aaPredicted RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 ZNF212Q9UDV6 495 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 SMG5Q9UPR3 1016 aaKnown RBP9.12□□□□□ -0.95
SSBP4-208ENST00000600628 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 THADAQ6YHU6 1953 aa9.12□□□□□ -0.95
SSBP4-208ENST00000600628 SPEGQ15772 3267 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 IGLV3-10A0A075B6K4 115 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 GOLGA6L7A0A1B0GV03 622 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TBC1D3BA6NDS4 549 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 C2CD4BA6NLJ0 364 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 C10orf142B7Z368 130 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TIMM44O43615 452 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 GRAP2O75791 330 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 KLF8O95600 359 aaPredicted RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 APBB3O95704 486 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 SLC2A3P11169 496 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 GZMAP12544 262 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 FERP16591 822 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 NTSR1P30989 418 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 CCR1P32246 355 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TIE1P35590 1138 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 PTPN9P43378 593 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 PXNP49023 591 aaPredicted RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 SEC13P55735 322 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 RPS24P62847 133 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 CDK17Q00537 523 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 C1QBPQ07021 282 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 SRSF5Q13243 272 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 MTA1Q13330 715 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 SIM2Q14190 667 aaPredicted RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 PTPRNQ16849 979 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 C2CD6Q53TS8 623 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 NAA35Q5VZE5 725 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 HGSNATQ68CP4 663 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 OR6B2Q6IFH4 312 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 RFWD3Q6PCD5 774 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TRMT11Q7Z4G4 463 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 ANKS1BQ7Z6G8 1248 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 METTL3Q86U44 580 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 ZNF513Q8N8E2 541 aaPredicted RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TXNDC5Q8NBS9 432 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms