RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 EBF3Q9H4W6 596 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 TMEM51Q9NW97 253 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 SLC12A6Q9UHW9 1150 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 FZD10Q9ULW2 581 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 USP18Q9UMW8 372 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 GUCA1BQ9UMX6 200 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 CAPN6Q9Y6Q1 641 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 OTOL1A6NHN0 477 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 SLC9A3R1O14745 358 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 TACR2P21452 398 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 COMTP21964 271 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 PDGFRLQ15198 375 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 ARTNQ5T4W7 220 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 ADGRF1Q5T601 910 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 C11orf63Q6NUN7 778 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 RFWD3Q6PCD5 774 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 SLFN11Q7Z7L1 901 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 C14orf80Q86SX3 495 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 ADGRG2Q8IZP9 1017 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 CPXM2Q8N436 756 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 SNRNP25Q9BV90 132 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 BRD9Q9H8M2 597 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 TRMT1Q9NXH9 659 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 LCMT1Q9UIC8 334 aa20.73■□□□□ 0.91
SHKBP1-222ENST00000600320 USP27XA6NNY8 438 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 KRT86O43790 486 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 PRPSAP2O60256 369 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 TSPAN3O60637 253 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 SSR1P43307 286 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 SGSHP51688 502 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 SCAPQ12770 1279 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 CA9Q16790 459 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 IER5LQ5T953 404 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 RHBDF2Q6PJF5 856 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 CHSY1Q86X52 802 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 TMEM25Q86YD3 366 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 PYROXD2Q8N2H3 581 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 LRRC57Q8N9N7 239 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 TTC8Q8TAM2 541 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 OTUB2Q96DC9 234 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 PRICKLE1Q96MT3 831 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 HAPLN3Q96S86 360 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 NCAPGQ9BPX3 1015 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 SIK2Q9H0K1 926 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 ZWILCHQ9H900 591 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 GTSE1Q9NYZ3 720 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 ALG6Q9Y672 507 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 COL4A3Q01955 1670 aa20.72■□□□□ 0.91
SHKBP1-222ENST00000600320 COL4A2P08572 1712 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 CYP17A1P05093 508 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 MLLT6P55198 1093 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 AUHQ13825 339 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 DHCR24Q15392 516 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 SMTNL2Q2TAL5 461 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 ARL13BQ3SXY8 428 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 LY6G5CQ5SRR4 150 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 TPGS1Q6ZTW0 290 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 ZNF683Q8IZ20 524 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 LGI2Q8N0V4 545 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 ECT2Q9H8V3 914 aa20.71■□□□□ 0.91
SHKBP1-222ENST00000600320 MYOFQ9NZM1 2061 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 FAM72CH0Y354 149 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 PALMO75781 387 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 RARAP10276 462 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 SRFP11831 508 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 GJC1P36383 396 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 SLC1A1P43005 524 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 IRAK1P51617 712 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 RUNX3Q13761 415 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 GAB4Q2WGN9 574 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 ATP13A4Q4VNC1 1196 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 EFHC2Q5JST6 749 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 KCNT1Q5JUK3 1230 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 FAM72AQ5TYM5 149 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 FAM72DQ6L9T8 149 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 FBXL22Q6P050 247 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 DAAM2Q86T65 1068 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 FAM72BQ86X60 149 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 RNF10Q8N5U6 811 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 IRF7Q92985 503 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 ATP2A3Q93084 1043 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 IGSF8Q969P0 613 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 CALR3Q96L12 384 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 IRX2Q9BZI1 471 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 OSBPL2Q9H1P3 480 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 SLC2A4RGQ9NR83 387 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 SPHK2Q9NRA0 654 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 VANGL2Q9ULK5 521 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 DUSP12Q9UNI6 340 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 AP4E1Q9UPM8 1137 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 SORCS3Q9UPU3 1222 aa20.7■□□□□ 0.9
SHKBP1-222ENST00000600320 TICRRQ7Z2Z1 1910 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 ZSCAN12O43309 604 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 NFATC1O95644 943 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 CHKAP35790 457 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 AIF1P55008 147 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 RPS24P62847 133 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 MTA1Q13330 715 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 IFI16Q16666 785 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 HADHQ16836 314 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms