RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 EFSO43281 561 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 SIGLEC6O43699 453 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 BEST1O76090 585 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 ZNF211Q13398 564 aaPredicted RBP18.47■□□□□ 0.55
SSBP4-207ENST00000600244 TTC31Q49AM3 519 aaPredicted RBP18.47■□□□□ 0.55
SSBP4-207ENST00000600244 C4orf17Q53FE4 359 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 L1TD1Q5T7N2 865 aaKnown RBP18.47■□□□□ 0.55
SSBP4-207ENST00000600244 NCEH1Q6PIU2 408 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 CLEC18BQ6UXF7 455 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 TRAPPC11Q7Z392 1133 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 SPATS2Q86XZ4 545 aaKnown RBP18.47■□□□□ 0.55
SSBP4-207ENST00000600244 CLEC18CQ8NCF0 446 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 RAD54LQ92698 747 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 SMARCD1Q96GM5 515 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 ACCSQ96QU6 501 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 SMOQ99835 787 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 NMUR1Q9HB89 426 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 NUDT5Q9UKK9 219 aa18.47■□□□□ 0.55
SSBP4-207ENST00000600244 A0A1W2PNU3 283 aaPredicted RBP18.46■□□□□ 0.55
SSBP4-207ENST00000600244 FAM47DPA6NHR8 397 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 CSO75390 466 aaKnown RBP18.46■□□□□ 0.55
SSBP4-207ENST00000600244 ARID5AQ03989 594 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 FUKQ8N0W3 1084 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 GOLGA1Q92805 767 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 CCDC97Q96F63 343 aaPredicted RBP18.46■□□□□ 0.55
SSBP4-207ENST00000600244 SLC46A1Q96NT5 459 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 MED10Q9BTT4 135 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 PCIF1Q9H4Z3 704 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 CSNK1G1Q9HCP0 422 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.46■□□□□ 0.55
SSBP4-207ENST00000600244 SCML2Q9UQR0 700 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 NCKAP1Q9Y2A7 1128 aa18.46■□□□□ 0.55
SSBP4-207ENST00000600244 LZTS3O60299 673 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-207ENST00000600244 AP1G2O75843 785 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 RARGP13631 454 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 CCR5P51681 352 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 PDE4CQ08493 712 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 SURF1Q15526 300 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 WDR72Q3MJ13 1102 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 FNDC3BQ53EP0 1204 aaKnown RBP18.45■□□□□ 0.54
SSBP4-207ENST00000600244 ZNF776Q68DI1 518 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-207ENST00000600244 FAM173BQ6P4H8 233 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 GPD1LQ8N335 351 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 CYB5D2Q8WUJ1 264 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 CALML4Q96GE6 196 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 SEMA3CQ99985 751 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 PABPC3Q9H361 631 aaKnown RBP18.45■□□□□ 0.54
SSBP4-207ENST00000600244 FBXL12Q9NXK8 326 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 SERGEFQ9UGK8 458 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 SEPT3Q9UH03 358 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 PLA2G4CQ9UP65 541 aa18.45■□□□□ 0.54
SSBP4-207ENST00000600244 PRPF6O94906 941 aaKnown RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 NUCB2P80303 420 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 CLN3Q13286 438 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 ARL6IP4Q66PJ3 421 aaKnown RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 WDR49Q8IV35 697 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 SLC25A45Q8N413 288 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 CPXM2Q8N436 756 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 ZNF276Q8N554 614 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 OR2T34Q8NGX1 318 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 PRR11Q96HE9 360 aaPredicted RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 AK8Q96MA6 479 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 PSMG3-AS1Q96PY0 264 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 RSPH9Q9H1X1 276 aaPredicted RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 MRPL44Q9H9J2 332 aaKnown RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 KRT82Q9NSB4 513 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 HSPBP1Q9NZL4 362 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 SEL1LQ9UBV2 794 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 AGO1Q9UL18 857 aaKnown RBP18.44■□□□□ 0.54
SSBP4-207ENST00000600244 SCML1Q9UN30 329 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 RELNP78509 3460 aa18.44■□□□□ 0.54
SSBP4-207ENST00000600244 CYP26A1O43174 497 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 HLA-FP30511 346 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 UBA7P41226 1012 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 TNNC1P63316 161 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 DAB2P98082 770 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 TLE1Q04724 770 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 SGO2Q562F6 1265 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 C10orf120Q5SQS8 335 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 MFSD2AQ8NA29 543 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 NOC3LQ8WTT2 800 aaKnown RBP18.43■□□□□ 0.54
SSBP4-207ENST00000600244 SERAC1Q96JX3 654 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 NEUROG2Q9H2A3 272 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 KCNK4Q9NYG8 393 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 TJP2Q9UDY2 1190 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 SATB2Q9UPW6 733 aa18.43■□□□□ 0.54
SSBP4-207ENST00000600244 A0A1B0GVM2 712 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 A0A1W2PQH9 124 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 LRRC72A6NJI9 287 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 ZNF233A6NK53 670 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 CDRT15L2A8MXV6 281 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 STAU1O95793 577 aaKnown RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 CYBBP04839 570 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 CKMT1AP12532 417 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 RBMS1P29558 406 aaKnown RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 CASP5P51878 434 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 ISXQ2M1V0 245 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 SLC45A4Q5BKX6 768 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 FOXD4L5Q5VV16 416 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms