RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 PCNX2A6NKB5 2137 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 GOLGA6L7A0A1B0GV03 622 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 SRRM3A6NNA2 597 aaPredicted RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 METTL12A8MUP2 240 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 M0QYV0 167 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 BCAT2O15382 392 aaPredicted RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 TIMM44O43615 452 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 SMC2O95347 1197 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 PABPC1P11940 636 aaKnown RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 TBXAS1P24557 533 aaPredicted RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 FMO5P49326 533 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 LRRC63Q05C16 580 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 SLC14A1Q13336 389 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 CAMK2GQ13555 558 aaPredicted RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 TRIP6Q15654 476 aaKnown RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 PTPRNQ16849 979 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 PMF1Q6P1K2 205 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 MSANTD2Q6P1R3 559 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 RAB44Q7Z6P3 723 aaPredicted RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 ADIPOR2Q86V24 386 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 PPM1KQ8N3J5 372 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 PNPLA1Q8N8W4 532 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 ENGASEQ8NFI3 743 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 OR2T3Q8NH03 318 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 SPATA20Q8TB22 786 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 SLC35F5Q8WV83 523 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 SNX19Q92543 992 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 TMA16Q96EY4 203 aaKnown RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 NT5C1BQ96P26 610 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 ZDHHC5Q9C0B5 715 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 LHX5Q9H2C1 402 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 TMEM245Q9H330 911 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 C6orf106Q9H6K1 298 aaPredicted RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 CNGB3Q9NQW8 809 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 ABCC13Q9NSE7 274 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 GGA2Q9UJY4 613 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 STOML2Q9UJZ1 356 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.97□□□□□ -0.65
LSM4-205ENST00000597776 FNDC3AQ9Y2H6 1198 aaKnown RBP10.97□□□□□ -0.65
LSM4-205ENST00000597776 NFE2L3Q9Y4A8 694 aa10.97□□□□□ -0.65
LSM4-205ENST00000597776 GOLGA6L4A6NEF3 574 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 H0Y626 953 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 PSMA7O14818 248 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 TBL1XO60907 577 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 TRIM16O95361 564 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 LATS1O95835 1130 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 IGLV3-27P01718 113 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 PAEPP09466 180 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 FTH1P19P0C7X4 201 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 SLC6A4P31645 630 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 CD70P32970 193 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 ACSL1P33121 698 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 ZNF445P59923 1031 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 E2F5Q15329 346 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 ZNF423Q2M1K9 1284 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 FAM133BQ5BKY9 247 aaKnown RBP10.96□□□□□ -0.65
LSM4-205ENST00000597776 MBLAC2Q68D91 279 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 KLHL10Q6JEL2 608 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 RRAGAQ7L523 313 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 KIAA0907Q7Z7F0 614 aaPredicted RBP10.96□□□□□ -0.65
LSM4-205ENST00000597776 ARHGEF19Q8IW93 802 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 AHI1Q8N157 1196 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.96□□□□□ -0.65
LSM4-205ENST00000597776 C1orf216Q8TAB5 229 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 WFIKKN2Q8TEU8 576 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 MYEOVQ96EZ4 313 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 PRICKLE1Q96MT3 831 aaPredicted RBP10.96□□□□□ -0.65
LSM4-205ENST00000597776 MIS12Q9H081 205 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 MTG2Q9H4K7 406 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 GAREM1Q9H706 876 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 STIM2Q9P246 746 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 MAN1B1Q9UKM7 699 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 KIAA1257Q9ULG3 409 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 PLA2G4CQ9UP65 541 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 PCDHB9Q9Y5E1 797 aa10.96□□□□□ -0.65
LSM4-205ENST00000597776 A0A1B0GVT2 93 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 CBFA2T3O75081 653 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 LTFP02788 710 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 DLDP09622 509 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 RDXP35241 583 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 MATKP42679 507 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 SLC11A2P49281 568 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 CSNK1EP49674 416 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 TBX4P57082 545 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 RPS14P62263 151 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 HNRNPDQ14103 355 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 CNGA2Q16280 664 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 HLA-BQ31612 363 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 CCDC40Q4G0X9 1142 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 PIK3R6Q5UE93 754 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 NADSYN1Q6IA69 706 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 TTI2Q6NXR4 508 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 LAYNQ6UX15 382 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 SCML4Q8N228 414 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 LMO3Q8TAP4 145 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 SETD7Q8WTS6 366 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 IRGQQ8WZA9 623 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms