RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SPEM2Q0P670 501 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 CSRP2Q16527 193 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 MAP7D1Q3KQU3 841 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 DCAF6Q58WW2 860 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 PLA2G2CQ5R387 149 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 OR6B2Q6IFH4 312 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 RFWD3Q6PCD5 774 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 DEFB106AQ8N104 65 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 ZNF557Q8N988 423 aaPredicted RBP13.55□□□□□ -0.24
USE1-207ENST00000596136 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 WFIKKN2Q8TEU8 576 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
USE1-207ENST00000596136 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 NT5C3BQ969T7 300 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 BTN2A3PQ96KV6 586 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 NAT10Q9H0A0 1025 aaKnown RBP13.55□□□□□ -0.24
USE1-207ENST00000596136 FAM207AQ9NSI2 230 aaPredicted RBP13.55□□□□□ -0.24
USE1-207ENST00000596136 SEMA4GQ9NTN9 838 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
USE1-207ENST00000596136 NOCTQ9UK39 431 aaKnown RBP13.55□□□□□ -0.24
USE1-207ENST00000596136 STON1Q9Y6Q2 735 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
USE1-207ENST00000596136 NUP205Q92621 2012 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 CACNA1AO00555 2505 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 TCRBV21S2A2A0A5A6 115 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 PRR5-ARHGAP8B1AHC4 643 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 FOXD2O60548 495 aaPredicted RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 DAB1O75553 588 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 RHOBTB1O94844 696 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 SLC2A3P11169 496 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 NOS2P35228 1153 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 SOX5P35711 763 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 IL12RB1P42701 662 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 WASP42768 502 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 ARHGAP8P85298 464 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 BYSLQ13895 437 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 SYCP1Q15431 976 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 ELF2Q15723 593 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 ZC3H12AQ5D1E8 599 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 MS4A13Q5J8X5 152 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 SPDYCQ5MJ68 293 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 PMS2CLQ68D20 193 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 KIAA1211LQ6NV74 962 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 CAVIN1Q6NZI2 390 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 METTL3Q86U44 580 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 ADIPOR2Q86V24 386 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 AOPEPQ8N6M6 819 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 FIBINQ8TAL6 211 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 HMGB4Q8WW32 186 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 C18orf8Q96DM3 657 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 MYEOVQ96EZ4 313 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 PRICKLE1Q96MT3 831 aaPredicted RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 TMEM51Q9NW97 253 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 CACNA2D2Q9NY47 1150 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 DLL3Q9NYJ7 618 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 RRN3Q9NYV6 651 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 XPO7Q9UIA9 1087 aaKnown RBP13.54□□□□□ -0.24
USE1-207ENST00000596136 LAMA1P25391 3075 aa13.54□□□□□ -0.24
USE1-207ENST00000596136 TBL1XO60907 577 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 GFPT2O94808 682 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 APOEP02649 317 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 CYP1A1P04798 512 aaPredicted RBP13.53□□□□□ -0.24
USE1-207ENST00000596136 MMEP08473 750 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ZNF806P0C7X5 589 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ATP1A3P13637 1013 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 CHRNB2P17787 502 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 BCKDHBP21953 392 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 GBP1P32455 592 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 MATKP42679 507 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ID4P47928 161 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 NOMO3P69849 1222 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 LMNB2Q03252 620 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 UBXN1Q04323 297 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 MTA1Q13330 715 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ZNF234Q14588 700 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 TAF3Q5VWG9 929 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ARCQ7LC44 396 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ERICH1Q86X53 443 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 ATP6V0D2Q8N8Y2 350 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 HJURPQ8NCD3 748 aaPredicted RBP13.53□□□□□ -0.24
USE1-207ENST00000596136 WFDC5Q8TCV5 224 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 PGAP3Q96FM1 320 aaPredicted RBP13.53□□□□□ -0.24
USE1-207ENST00000596136 NPY6RQ99463 290 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 PRMT1Q99873 361 aaKnown RBP13.53□□□□□ -0.24
USE1-207ENST00000596136 ARRDC1-AS1Q9H2J1 176 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 NLRC4Q9NPP4 1024 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 MBD1Q9UIS9 605 aaPredicted RBP13.53□□□□□ -0.24
USE1-207ENST00000596136 GGA2Q9UJY4 613 aa13.53□□□□□ -0.24
USE1-207ENST00000596136 BCLAF3A2AJT9 711 aaKnown RBP13.52□□□□□ -0.25
USE1-207ENST00000596136 SMTNL1A8MU46 457 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 GRAP2O75791 330 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms