RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 NADSYN1Q6IA69 706 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 FSTL4Q6MZW2 842 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 RFWD3Q6PCD5 774 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 BNIPLQ7Z465 357 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 C12orf40Q86WS4 652 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 ETFBKMTQ8IXQ9 262 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 CLDN23Q96B33 292 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 PANX2Q96RD6 677 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 PNKPQ96T60 521 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 CNPY3Q9BT09 278 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 IRX2Q9BZI1 471 aaPredicted RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 LMAN1LQ9HAT1 526 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 MRPL47Q9HD33 250 aaKnown RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 PLK2Q9NYY3 685 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 DEC1Q9P2X7 70 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 XPO7Q9UIA9 1087 aaKnown RBP14.89□□□□□ -0.03
LIG1-208ENST00000595758 NENFQ9UMX5 172 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 SCINQ9Y6U3 715 aa14.89□□□□□ -0.03
LIG1-208ENST00000595758 CACNG3O60359 315 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 TULP3O75386 442 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 PAGE1O75459 146 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 SLC6A4P31645 630 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 ATXN1P54253 815 aaKnown RBP14.88□□□□□ -0.03
LIG1-208ENST00000595758 GALCP54803 685 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 PREPLQ4J6C6 727 aaPredicted RBP14.88□□□□□ -0.03
LIG1-208ENST00000595758 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 PIK3R6Q5UE93 754 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 STRADAQ7RTN6 431 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.88□□□□□ -0.03
LIG1-208ENST00000595758 CHSY1Q86X52 802 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 TMEM105Q8N8V8 129 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 SPC24Q8NBT2 197 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 CENPIQ92674 756 aaPredicted RBP14.88□□□□□ -0.03
LIG1-208ENST00000595758 P2RY11Q96G91 374 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 TKTL2Q9H0I9 626 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 THAP2Q9H0W7 228 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 ARHGEF4Q9NR80 690 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 DNAJC17Q9NVM6 304 aaKnown RBP14.88□□□□□ -0.03
LIG1-208ENST00000595758 ARHGEF38Q9NXL2 777 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 IMPACTQ9P2X3 320 aa14.88□□□□□ -0.03
LIG1-208ENST00000595758 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 TMEM191CA6NGB0 347 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 KAT7O95251 611 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 EGFP01133 1207 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 APODP05090 189 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 DESP17661 470 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 TACR2P21452 398 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 GRIA2P42262 883 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 RPS9P46781 194 aaKnown RBP14.87□□□□□ -0.03
LIG1-208ENST00000595758 KDSRQ06136 332 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 CCINQ13939 588 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 RAB6CQ53S08 254 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 MS4A13Q5J8X5 152 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 RAP1GAP2Q684P5 730 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 GRAMD4Q6IC98 578 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 FAM131BQ86XD5 332 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 LGI2Q8N0V4 545 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 SYNPOQ8N3V7 929 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 HJURPQ8NCD3 748 aaPredicted RBP14.87□□□□□ -0.03
LIG1-208ENST00000595758 FAM172AQ8WUF8 416 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 SIK2Q9H0K1 926 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 RAB6CQ9H0N0 254 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 RBM12Q9NTZ6 932 aaKnown RBP14.87□□□□□ -0.03
LIG1-208ENST00000595758 SPTLC3Q9NUV7 552 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 DLGAP2Q9P1A6 1054 aa14.87□□□□□ -0.03
LIG1-208ENST00000595758 TYW5A2RUC4 315 aaKnown RBP14.86□□□□□ -0.03
LIG1-208ENST00000595758 TBC1D3BA6NDS4 549 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 GOLGA6L6A8MZA4 724 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 F5H5T6 163 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 TRIM24O15164 1050 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 CCP110O43303 1012 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 TBL1XO60907 577 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 CYP1A2P05177 515 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 H2AFZP0C0S5 128 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 CISD3P0C7P0 127 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 PSMA2P25787 234 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 HOXD9P28356 352 aaPredicted RBP14.86□□□□□ -0.03
LIG1-208ENST00000595758 MAGEA9P43362 315 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 DGKGP49619 791 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 SGSHP51688 502 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 HDAC4P56524 1084 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 OGDHQ02218 1023 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 MESP2Q0VG99 397 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 ARL13BQ3SXY8 428 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 FBXO43Q4G163 708 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 MPP7Q5T2T1 576 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 H2AFVQ71UI9 128 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 CTNNBL1Q8WYA6 563 aaPredicted RBP14.86□□□□□ -0.03
LIG1-208ENST00000595758 MYEOVQ96EZ4 313 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 PRMT1Q99873 361 aaKnown RBP14.86□□□□□ -0.03
LIG1-208ENST00000595758 SLC2A11Q9BYW1 496 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 GRPEL1Q9HAV7 217 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 ANLNQ9NQW6 1124 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 STIM2Q9P246 746 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 FBXO10Q9UK96 956 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 HS3ST4Q9Y661 456 aa14.86□□□□□ -0.03
LIG1-208ENST00000595758 A0A0A0MRY4 1105 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 I6L893 689 aaPredicted RBP14.85□□□□□ -0.03
LIG1-208ENST00000595758 ADRA1BP35368 520 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms