RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MTG2Q9H4K7 406 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 MAGEF1Q9HAY2 307 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 PRSS16Q9NQE7 514 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 HSPBP1Q9NZL4 362 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 SCML2Q9UQR0 700 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 KLK10O43240 276 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 DNTTP04053 509 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 CKMT2P17540 419 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 CORO1AP31146 461 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 HOXD13P35453 343 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 CSRP3P50461 194 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 KRT85P78386 507 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 ALCAMQ13740 583 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 BECN1Q14457 450 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 EIF4HQ15056 248 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 COLEC12Q5KU26 742 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 KIAA1614Q5VZ46 1190 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 CNNM4Q6P4Q7 775 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 SCD5Q86SK9 330 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 CCDC65Q8IXS2 484 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 C12orf29Q8N999 325 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 GANCQ8TET4 914 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 MED8Q96G25 268 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 GZF1Q9H116 711 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 CSNK1G1Q9HCP0 422 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 AASDHPPTQ9NRN7 309 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 FAM49BQ9NUQ9 324 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 FAM13BQ9NYF5 915 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 AGO1Q9UL18 857 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 MYH10P35580 1976 aa14.4□□□□□ -0.1
SHKBP1-208ENST00000595726 A0A1W2PPC4 97 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 HHLA1C9JL84 531 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 TIMM44O43615 452 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 MT-CO3P00414 261 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 EPHA8P29322 1005 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 CHKAP35790 457 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 GALCP54803 685 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 PCBP4P57723 403 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 ASIC1P78348 528 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 AMPD3Q01432 767 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 TRPC3Q13507 836 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 KCNJ12Q14500 433 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 DENND1CQ8IV53 801 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 DHX40Q8IX18 779 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 DDI1Q8WTU0 396 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 SPATA32Q96LK8 384 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 SGK2Q9HBY8 427 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 SERGEFQ9UGK8 458 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 IL17BQ9UHF5 180 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 NAGPAQ9UK23 515 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 PLXNA2O75051 1894 aa14.39□□□□□ -0.11
SHKBP1-208ENST00000595726 A0A1W2PR77 199 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 C7P10643 843 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 CD38P28907 300 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 ADORA2BP29275 332 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 CASP1P29466 404 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 UCNP55089 124 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 EFEMP1Q12805 493 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 ILKQ13418 452 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 SNRNP35Q16560 246 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 KLHDC10Q6PID8 442 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 NCEH1Q6PIU2 408 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 ZC3H3Q8IXZ2 948 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 CACTIN-AS1Q8N1I8 211 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 RFFLQ8WZ73 363 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 CGRRF1Q99675 332 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 C7orf25Q9BPX7 421 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 RASAL2Q9UJF2 1139 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 PLA2G4CQ9UP65 541 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 ATP6V1DQ9Y5K8 247 aa14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 ARID1BQ8NFD5 2236 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-208ENST00000595726 KIAA0391O15091 583 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 CLIC2O15247 247 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 PHACTR2O75167 634 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 CLSTN1O94985 981 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 STAU1O95793 577 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 CYBBP04839 570 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 PFKFB1P16118 471 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 HLA-FP30511 346 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 CASP4P49662 377 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 NDST1P52848 882 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 ZBTB16Q05516 673 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 CYP24A1Q07973 514 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 EHHADHQ08426 723 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 PSMD6Q15008 389 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 SFMBT2Q5VUG0 894 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 KANSL1Q7Z3B3 1105 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 KCNE4Q8WWG9 221 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 ZNF578Q96N58 590 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 SLC2A11Q9BYW1 496 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 NEUROG2Q9H2A3 272 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 BLZF1Q9H2G9 400 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 FBXL12Q9NXK8 326 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 ADAMTS1Q9UHI8 967 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms