RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PLD5Q8N7P1 536 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PCDH19Q8TAB3 1148 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 HSFY1Q96LI6 401 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 DUSP16Q9BY84 665 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 DHX35Q9H5Z1 703 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 GALNT8Q9NY28 637 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF212Q9UDV6 495 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 CIDEBQ9UHD4 219 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 PADI3Q9ULW8 664 aa17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-205ENST00000594973 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 TCRBV7S3A2A0A539 114 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 XPO1O14980 1071 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 GPR182O15218 404 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 NDUFV1P49821 464 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 BCAR1P56945 870 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 MGAT3Q09327 533 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 HIF1AQ16665 826 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 SH2D4BQ5SQS7 431 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 AGMOQ6ZNB7 445 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 CEP128Q6ZU80 1094 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 CENPUQ71F23 418 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 PPIL6Q8IXY8 311 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 NRG4Q8WWG1 115 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 TBCBQ99426 244 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 HNRNPABQ99729 332 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 CENPKQ9BS16 269 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 TUBB6Q9BUF5 446 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 CHST12Q9NRB3 414 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
SHKBP1-205ENST00000594973 APOL1O14791 398 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 MAP3K7O43318 606 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 NPR3P17342 541 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 PTPN9P43378 593 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 MAP3K7CLP57077 242 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 RCN1Q15293 331 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 SLC45A4Q5BKX6 768 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 DSTYKQ6XUX3 929 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 PAQR9Q6ZVX9 377 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 PCGF5Q86SE9 256 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 CYP4X1Q8N118 509 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 CCDC185Q8N715 623 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 CCDC77Q9BR77 488 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 VPS37BQ9H9H4 285 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 TRMT13Q9NUP7 481 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 STX18Q9P2W9 335 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 MDM4O15151 490 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 MGEA5O60502 916 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 AOC2O75106 756 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 POMCP01189 267 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 RPL34P49207 117 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 DCAF6Q58WW2 860 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 DEFB106AQ8N104 65 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 CCDC33Q8N5R6 958 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 SMC1BQ8NDV3 1235 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 MRRFQ96E11 262 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 OLFM3Q96PB7 478 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF184Q99676 751 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 C11orf84Q9BUA3 381 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 OCEL1Q9H607 264 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 PREBQ9HCU5 417 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 KRT82Q9NSB4 513 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 RNF186Q9NXI6 227 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 PHTF1Q9UMS5 762 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-205ENST00000594973 I3L4J1 428 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 GABRDO14764 452 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 ADCY1Q08828 1119 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 DBN1Q16643 649 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 FNBP1LQ5T0N5 605 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 CLEC20AQ6ZU45 233 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 FAM131BQ86XD5 332 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 NAT8LQ8N9F0 302 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 CRTAC1Q9NQ79 661 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 XPO7Q9UIA9 1087 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 AP4E1Q9UPM8 1137 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 NAALADL1Q9UQQ1 740 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 EXOC1LA0A1B0GW35 172 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 KCNN4O15554 427 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 TMEM63AO94886 807 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 LYNP07948 512 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 CYP2F1P24903 491 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 L1CAMP32004 1257 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 SESN3P58005 492 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 STAT4Q14765 748 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 MSS51Q4VC12 460 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 EFHC1Q5JVL4 640 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF449Q6P9G9 518 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 FAM47EQ6ZV65 393 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF398Q8TD17 642 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 CENPIQ92674 756 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 TBC1D30Q9Y2I9 924 aa17.6■□□□□ 0.41
SHKBP1-205ENST00000594973 MYBPHLA2RUH7 354 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms