RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 LSM8O95777 96 aaKnown RBP18.01■□□□□ 0.47
IRF3-208ENST00000594387 ATP5BP06576 529 aaKnown RBP18.01■□□□□ 0.47
IRF3-208ENST00000594387 HOXD9P28356 352 aaPredicted RBP18.01■□□□□ 0.47
IRF3-208ENST00000594387 CCR1P32246 355 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 SOX5P35711 763 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 CSRP2Q16527 193 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 GEN1Q17RS7 908 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 ZC3H12AQ5D1E8 599 aaKnown RBP18.01■□□□□ 0.47
IRF3-208ENST00000594387 DPY19L2P1Q6NXN4 242 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 MFN1Q8IWA4 741 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 AHI1Q8N157 1196 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 C12orf50Q8NA57 414 aaPredicted RBP18.01■□□□□ 0.47
IRF3-208ENST00000594387 ACOX2Q99424 681 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 GABRG3Q99928 467 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 SEMA4GQ9NTN9 838 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 DDIT4Q9NX09 232 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 CACNA2D2Q9NY47 1150 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 COX16Q9P0S2 106 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 THAP10Q9P2Z0 257 aaPredicted RBP18.01■□□□□ 0.47
IRF3-208ENST00000594387 STAP1Q9ULZ2 295 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 STON1Q9Y6Q2 735 aa18.01■□□□□ 0.47
IRF3-208ENST00000594387 EP300Q09472 2414 aaPredicted RBP18■□□□□ 0.47
IRF3-208ENST00000594387 LRRC10BA6NIK2 292 aa18■□□□□ 0.47
IRF3-208ENST00000594387 LGALS16A8MUM7 142 aa18■□□□□ 0.47
IRF3-208ENST00000594387 DCLK1O15075 740 aa18■□□□□ 0.47
IRF3-208ENST00000594387 ZNF217O75362 1048 aa18■□□□□ 0.47
IRF3-208ENST00000594387 EPN2O95208 641 aa18■□□□□ 0.47
IRF3-208ENST00000594387 MOCS3O95396 460 aa18■□□□□ 0.47
IRF3-208ENST00000594387 ERBB2P04626 1255 aa18■□□□□ 0.47
IRF3-208ENST00000594387 CCDC172P0C7W6 258 aa18■□□□□ 0.47
IRF3-208ENST00000594387 POLR2EP19388 210 aaKnown RBP18■□□□□ 0.47
IRF3-208ENST00000594387 NOS2P35228 1153 aa18■□□□□ 0.47
IRF3-208ENST00000594387 RNASE9P60153 205 aaKnown RBP18■□□□□ 0.47
IRF3-208ENST00000594387 TPM4P67936 248 aa18■□□□□ 0.47
IRF3-208ENST00000594387 TAF5Q15542 800 aa18■□□□□ 0.47
IRF3-208ENST00000594387 SERPINA13PQ6UXR4 307 aa18■□□□□ 0.47
IRF3-208ENST00000594387 CHST9Q7L1S5 443 aa18■□□□□ 0.47
IRF3-208ENST00000594387 LPCAT2Q7L5N7 544 aa18■□□□□ 0.47
IRF3-208ENST00000594387 CHSY1Q86X52 802 aa18■□□□□ 0.47
IRF3-208ENST00000594387 CARNMT1Q8N4J0 409 aa18■□□□□ 0.47
IRF3-208ENST00000594387 SLC39A13Q96H72 371 aa18■□□□□ 0.47
IRF3-208ENST00000594387 BPIFA3Q9BQP9 254 aa18■□□□□ 0.47
IRF3-208ENST00000594387 DUSP15Q9H1R2 295 aaPredicted RBP18■□□□□ 0.47
IRF3-208ENST00000594387 GANQ9H2C0 597 aa18■□□□□ 0.47
IRF3-208ENST00000594387 ABCB8Q9NUT2 735 aa18■□□□□ 0.47
IRF3-208ENST00000594387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18■□□□□ 0.47
IRF3-208ENST00000594387 PAXBP1Q9Y5B6 917 aa18■□□□□ 0.47
IRF3-208ENST00000594387 F5H5T6 163 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 H0Y626 953 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 DAB1O75553 588 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 PABPC1P11940 636 aaKnown RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 GABRG2P18507 467 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 SLC6A4P31645 630 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 CDH5P33151 784 aaPredicted RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 DHPSP49366 369 aaPredicted RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 KLK7P49862 253 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 CREB5Q02930 508 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 NME3Q13232 169 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 CDH18Q13634 790 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 PTPN20Q4JDL3 420 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 FAM133BQ5BKY9 247 aaKnown RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 MS4A13Q5J8X5 152 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 SLC36A4Q6YBV0 504 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 SLC26A9Q7LBE3 791 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 LGI2Q8N0V4 545 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 ZNF397Q8NF99 534 aaPredicted RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 RLN3Q8WXF3 142 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 SLC2A13Q96QE2 648 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 GGA2Q9UJY4 613 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 CDV3Q9UKY7 258 aaKnown RBP17.99■□□□□ 0.47
IRF3-208ENST00000594387 CLEC4EQ9ULY5 219 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 RAD54BQ9Y620 910 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 CKAP5Q14008 2032 aa17.99■□□□□ 0.47
IRF3-208ENST00000594387 KCNU1A8MYU2 1149 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 M0QYT0 321 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 F9P00740 461 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 EPHX1P07099 455 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 MMEP08473 750 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 TACR2P21452 398 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 HLA-FP30511 346 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 P2RY2P41231 377 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 DPP6P42658 865 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 MATKP42679 507 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 ZNF165P49910 485 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 ST8SIA6P61647 398 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 CDR2Q01850 454 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 ZNF234Q14588 700 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 PUM1Q14671 1186 aaKnown RBP eCLIP17.98■□□□□ 0.47
IRF3-208ENST00000594387 FNDC3BQ53EP0 1204 aaKnown RBP17.98■□□□□ 0.47
IRF3-208ENST00000594387 RABGAP1LQ5R372 815 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 FAM102AQ5T9C2 384 aaPredicted RBP17.98■□□□□ 0.47
IRF3-208ENST00000594387 RAP1GAP2Q684P5 730 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 NADSYN1Q6IA69 706 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 OLFML1Q6UWY5 402 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 KIAA1324Q6UXG2 1013 aaKnown RBP17.98■□□□□ 0.47
IRF3-208ENST00000594387 TRIM72Q6ZMU5 477 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 PRR23CQ6ZRP0 262 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 OLIG1Q8TAK6 271 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms