RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CACNA2D2Q9NY47 1150 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 THAP10Q9P2Z0 257 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 DAAM1Q9Y4D1 1078 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 TCRBV21S2A2A0A5A6 115 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 CHRNB2P17787 502 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 SNX16P57768 344 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 CDK17Q00537 523 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 SPEM2Q0P670 501 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 ENPP2Q13822 863 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 USP39Q53GS9 565 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 ZDHHC17Q8IUH5 632 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 WFDC5Q8TCV5 224 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 SLC20A1Q8WUM9 679 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 HMGB4Q8WW32 186 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 LOXL4Q96JB6 756 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 PDCL3Q9H2J4 239 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 SYNCQ9H7C4 482 aa19.19■□□□□ 0.66
SHKBP1-202ENST00000593764 FAM170AA1A519 330 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 KCNU1A8MYU2 1149 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 TBL1XO60907 577 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 LSM8O95777 96 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 MOCS2O96007 188 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 GABRG2P18507 467 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 RPS24P62847 133 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 NOMO3P69849 1222 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 MS4A13Q5J8X5 152 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 SDE2Q6IQ49 451 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 ERICH1Q86X53 443 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 ZNF677Q86XU0 584 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 XYLT1Q86Y38 959 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 GPR161Q8N6U8 529 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 NEK11Q8NG66 645 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 IPO4Q8TEX9 1081 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 RLN3Q8WXF3 142 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 CPA5Q8WXQ8 436 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 SORCS1Q8WY21 1168 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 C18orf8Q96DM3 657 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 LMLNQ96KR4 655 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 BTN2A3PQ96KV6 586 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 DDX50Q9BQ39 737 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 ADAM33Q9BZ11 813 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 ABCB8Q9NUT2 735 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 DDIT4Q9NX09 232 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 CALCOCO1Q9P1Z2 691 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 RAD54BQ9Y620 910 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 STON1Q9Y6Q2 735 aa19.18■□□□□ 0.66
SHKBP1-202ENST00000593764 LAMA1P25391 3075 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 DNAH14Q0VDD8 3507 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 SMTNL1A8MU46 457 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 NPC1O15118 1278 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 TEX33O43247 280 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 TIMM44O43615 452 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 LRP3O75074 770 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 DAB1O75553 588 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 CYP1A1P04798 512 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 BCKDHBP21953 392 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 NOS2P35228 1153 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 P2RY2P41231 377 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 STAT1P42224 750 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 IL12RB1P42701 662 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 ZNF165P49910 485 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 FMO1Q01740 532 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 CDR2Q01850 454 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 IQCB1Q15051 598 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 EIF4HQ15056 248 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 C2CD6Q53TS8 623 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 ADIPOR2Q86V24 386 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 FRMD1Q8N878 549 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 ERLEC1Q96DZ1 483 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 PCMTD1Q96MG8 357 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 SPAG5Q96R06 1193 aa19.17■□□□□ 0.66
SHKBP1-202ENST00000593764 EPN2O95208 641 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 APOEP02649 317 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 TFE3P19532 575 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 SCNN1AP37088 669 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 MATKP42679 507 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 ZNF234Q14588 700 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 MAP7D1Q3KQU3 841 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 OTUD1Q5VV17 481 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 NAA35Q5VZE5 725 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 CFAP52Q8N1V2 620 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 HJURPQ8NCD3 748 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 FIBINQ8TAL6 211 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 UCMAQ8WVF2 138 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 NT5C3BQ969T7 300 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 NPY6RQ99463 290 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 PRMT1Q99873 361 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 CIPCQ9C0C6 399 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 FAM204AQ9H8W3 233 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 RTN4Q9NQC3 1192 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 SEMA4GQ9NTN9 838 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 STIM2Q9P246 746 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 BCCIPQ9P287 314 aaKnown RBP eCLIP19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 GGA2Q9UJY4 613 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 RALGAPA1Q6GYQ0 2036 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 GON4LQ3T8J9 2241 aa19.16■□□□□ 0.66
SHKBP1-202ENST00000593764 SYNJ2BP-COX16A0A087WUM0 186 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 SYCE3A1L190 88 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms