RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	TLR6	Q9Y2C9	796 aa		13.61	□□□□□ -0.23
PRKCSH-218	ENST00000593053	LAMA1	P25391	3075 aa		13.61	□□□□□ -0.23
PRKCSH-218	ENST00000593053	ABCA7	Q8IZY2	2146 aa		13.61	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CDX4	O14627	284 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	IRAK2	O43187	625 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	NDUFS2	O75306	463 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	MOCS2	O96007	188 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CFI	P05156	583 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PABPC1	P11940	636 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	HLA-E	P13747	358 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	DPP6	P42658	865 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	NNT	Q13423	1086 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	MAN2A1	Q16706	1144 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	FNDC3B	Q53EP0	1204 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	MPP7	Q5T2T1	576 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	DAB2IP	Q5VWQ8	1189 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CHST9	Q7L1S5	443 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	BEND5	Q7L4P6	421 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	ADIPOR2	Q86V24	386 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CACUL1	Q86Y37	369 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	TMPRSS6	Q8IU80	811 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PASD1	Q8IV76	773 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	SLC41A1	Q8IVJ1	513 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	FAM114A1	Q8IWE2	563 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	AHI1	Q8N157	1196 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	WFDC5	Q8TCV5	224 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CYB5D2	Q8WUJ1	264 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	AZIN2	Q96A70	460 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	MYEOV	Q96EZ4	313 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	SIPA1	Q96FS4	1042 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	SLC39A13	Q96H72	371 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	STIM2	Q9P246	746 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	TJP2	Q9UDY2	1190 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	DACH1	Q9UI36	760 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	DNAJC12	Q9UKB3	198 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PLA2G4C	Q9UP65	541 aa		13.6	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PNMA6A	P0CW24	399 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PRKCSH	P14314	528 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	ERCC5	P28715	1186 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CD6	P30203	668 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CD70	P32970	193 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	HOXD12	P35452	270 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	MAPK8	P45983	427 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	COPA	P53621	1224 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	RPS24	P62847	133 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	YWHAZ	P63104	245 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	LMAN2	Q12907	356 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	TAF5	Q15542	800 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	UAP1L1	Q3KQV9	507 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	VWA3B	Q502W6	1294 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	MBLAC2	Q68D91	279 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	METTL3	Q86U44	580 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	WDTC1	Q8N5D0	677 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	ZNF366	Q8N895	744 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	HJURP	Q8NCD3	748 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	PRCC	Q92733	491 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	TOE1	Q96GM8	510 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	CPXM1	Q96SM3	734 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	DDX50	Q9BQ39	737 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	TUBGCP2	Q9BSJ2	902 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	IRX2	Q9BZI1	471 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	NUCKS1	Q9H1E3	243 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	NDST4	Q9H3R1	872 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	POPDC2	Q9HBU9	364 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	FSCN3	Q9NQT6	498 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	ITM2C	Q9NQX7	267 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	USP36	Q9P275	1121 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	XPO7	Q9UIA9	1087 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	RALGAPA1	Q6GYQ0	2036 aa		13.59	□□□□□ -0.23
PRKCSH-218	ENST00000593053	TYW5	A2RUC4	315 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KCNJ18	B7U540	433 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FOXN3	O00409	490 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PES1	O00541	588 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KCNK5	O95279	499 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TRUB2	O95900	331 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	APOE	P02649	317 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ENG	P17813	658 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PITX1	P78337	314 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PTK2	Q05397	1052 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PTPRN	Q16849	979 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DUOXA1	Q1HG43	343 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MS4A13	Q5J8X5	152 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MIIP	Q5JXC2	388 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC23A3	Q6PIS1	610 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MFN1	Q8IWA4	741 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	RGL4	Q8IZJ4	473 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ZNF557	Q8N988	423 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	C1orf131	Q8NDD1	294 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CEP76	Q8TAP6	659 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FOXJ1	Q92949	421 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PPP1R13B	Q96KQ4	1090 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TMEM245	Q9H330	911 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	LMBRD1	Q9NUN5	540 aa		13.58	□□□□□ -0.24

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