RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LRRC57Q8N9N7 239 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 KIAA1524Q8TCG1 905 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 SH3RF2Q8TEC5 729 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 FAM3CQ92520 227 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 KRT35Q92764 455 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ATOH1Q92858 354 aaPredicted RBP10.02□□□□□ -0.81
DDX39A-220ENST00000593008 NT5C3BQ969T7 300 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 PRRX2Q99811 253 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 CNPY3Q9BT09 278 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 KCNH6Q9H252 994 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 EBF3Q9H4W6 596 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ZWILCHQ9H900 591 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 THG1LQ9NWX6 298 aaKnown RBP10.02□□□□□ -0.81
DDX39A-220ENST00000593008 OBP2AQ9NY56 170 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 DLGAP2Q9P1A6 1054 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 UVRAGQ9P2Y5 699 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ZMYM5Q9UJ78 669 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 WNT6Q9Y6F9 365 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 A0A0A6YYK5 440 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 OTOL1A6NHN0 477 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 FAM72CH0Y354 149 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 NRDCO43847 1150 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 STC2O76061 302 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 IGLV3-27P01718 113 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 COMTP21964 271 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 MIPP30301 263 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 CORO1AP31146 461 aaKnown RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 RDXP35241 583 aaKnown RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 ATP5C1P36542 298 aaKnown RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 NUMBP49757 651 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 PSEN1P49768 467 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 TUBP50607 506 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SGSHP51688 502 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 NAP1L1P55209 391 aaKnown RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SNX16P57768 344 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SLC7A9P82251 487 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 DEUP1Q05D60 604 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 TCEAL1Q15170 157 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 ANGPT1Q15389 498 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 TRIP4Q15650 581 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF77Q15935 545 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 ARTNQ5T4W7 220 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 FAM72AQ5TYM5 149 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 PIK3R6Q5UE93 754 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 FAM72DQ6L9T8 149 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 PPP1R2P3Q6NXS1 205 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SCYL2Q6P3W7 929 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 TXNDC11Q6PKC3 985 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 C14orf80Q86SX3 495 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 FAM72BQ86X60 149 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 CIR1Q86X95 450 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 BBS7Q8IWZ6 715 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 RHOT2Q8IXI1 618 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 CENPIQ92674 756 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SLC39A13Q96H72 371 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 FAM83CQ9BQN1 747 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 MRPL47Q9HD33 250 aaKnown RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 TRPV5Q9NQA5 729 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 HPS4Q9NQG7 708 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 SPATA6Q9NWH7 488 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 ARHGAP26Q9UNA1 814 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 ZKSCAN5Q9Y2L8 839 aa10.01□□□□□ -0.81
DDX39A-220ENST00000593008 NUP210Q8TEM1 1887 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-220ENST00000593008 CACNA1HO95180 2353 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 SOBPA7XYQ1 873 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 BTNL10A8MVZ5 291 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 MAN2B1O00754 1011 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 PAGE1O75459 146 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 CD48P09326 243 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 SLC6A4P31645 630 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 CTHP32929 405 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 SSR1P43307 286 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 PPP3CCP48454 512 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 CXCR3P49682 368 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 NUBP1P53384 320 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 FZD5Q13467 585 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 RUNX3Q13761 415 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 PON2Q15165 354 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 LLGL1Q15334 1064 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 ITPRIPL2Q3MIP1 535 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 RAP1GAP2Q684P5 730 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 NAIF1Q69YI7 327 aaPredicted RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 C11orf63Q6NUN7 778 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 AADACL2Q6P093 401 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 RFWD3Q6PCD5 774 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 BEND5Q7L4P6 421 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 ARCQ7LC44 396 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 DENND1CQ8IV53 801 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 SLC35F6Q8N357 371 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 NIPA2Q8N8Q9 360 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 NETO2Q8NC67 525 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 PRICKLE1Q96MT3 831 aaPredicted RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 SERPINB11Q96P15 392 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 KCTD15Q96SI1 283 aaPredicted RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 HERPUD2Q9BSE4 406 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 SNRNP25Q9BV90 132 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 TKTL2Q9H0I9 626 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms