RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 ARL14EPQ8N8R7 260 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-219ENST00000592927 RNF139Q8WU17 664 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 CYP2S1Q96SQ9 504 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 TLR10Q9BXR5 811 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 ABCC13Q9NSE7 274 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX39A-219ENST00000592927 OSER1Q9NX31 292 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 ANAPC7Q9UJX3 599 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 MRFAP1Q9Y605 127 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 ALG6Q9Y672 507 aa12.38□□□□□ -0.43
DDX39A-219ENST00000592927 PATJQ8NI35 1801 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 GOLGA8SH3BPF8 625 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 TAF4O00268 1085 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 ENC1O14682 589 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 CAPN9O14815 690 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 COCHO43405 550 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 HSF2BPO75031 334 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 GLI1P08151 1106 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 NCAM1P13591 858 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 WEE1P30291 646 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 MAN1A1P33908 653 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 ATP5C1P36542 298 aaKnown RBP12.37□□□□□ -0.43
DDX39A-219ENST00000592927 TERF1P54274 439 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 NRLP54845 237 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 YWHAZP63104 245 aaKnown RBP12.37□□□□□ -0.43
DDX39A-219ENST00000592927 MESDQ14696 234 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 WHAMMP3Q1A5X7 153 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 PPP1R15BQ5SWA1 713 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 FAM102AQ5T9C2 384 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-219ENST00000592927 DCUN1D2Q6PH85 259 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 POTEHQ6S545 545 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 OLFML1Q6UWY5 402 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 MTSS1LQ765P7 747 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-219ENST00000592927 ZNF276Q8N554 614 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 FNIP1Q8TF40 1166 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 EDEM1Q92611 657 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 FGF14Q92915 247 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 PBKQ96KB5 322 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 ASB16Q96NS5 453 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 SLC22A12Q96S37 553 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 SELENOOQ9BVL4 669 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 RNF38Q9H0F5 515 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 OLA1Q9NTK5 396 aaKnown RBP12.37□□□□□ -0.43
DDX39A-219ENST00000592927 ASNSD1Q9NWL6 643 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 RNF14Q9UBS8 474 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 IP6K2Q9UHH9 426 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 DNMT3LQ9UJW3 386 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 NUDT5Q9UKK9 219 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 COL4A3Q01955 1670 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 NOTCH4Q99466 2003 aa12.37□□□□□ -0.43
DDX39A-219ENST00000592927 DPYSL4O14531 572 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 NCAM2O15394 837 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 FOXD2O60548 495 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 GRAP2O75791 330 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 PROSCO94903 275 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 KCNK5O95279 499 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 OLFM2O95897 454 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 TBX18O95935 607 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 FTCDO95954 541 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 MBL2P11226 248 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 KRT3P12035 628 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 TDGF1P13385 188 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 TARSP26639 723 aaKnown RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 RNASE9P60153 205 aaKnown RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 SLC7A9P82251 487 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 MTAPQ13126 283 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 SIM2Q14190 667 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 PIGHQ14442 188 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 TAF5Q15542 800 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 AASDHQ4L235 1098 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 KLHDC10Q6PID8 442 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 PARM1Q6UWI2 310 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 BEND5Q7L4P6 421 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 SLC26A9Q7LBE3 791 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 UBL4BQ8N7F7 174 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 CEP112Q8N8E3 955 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 PIWIL1Q96J94 861 aaKnown RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 OSBPL9Q96SU4 736 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 NELL2Q99435 816 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
DDX39A-219ENST00000592927 TRPV4Q9HBA0 871 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 POPDC2Q9HBU9 364 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 ZFP14Q9HCL3 533 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 TDP1Q9NUW8 608 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 GREB1Q4ZG55 1949 aa12.36□□□□□ -0.43
DDX39A-219ENST00000592927 CCDC66A2RUB6 948 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 TMEM8BA6NDV4 472 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 MDM4O15151 490 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms