RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 L1TD1Q5T7N2 865 aaKnown RBP7.04□□□□□ -1.28
VMP1-215ENST00000592619 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 MZT2BQ6NZ67 158 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 DSTYKQ6XUX3 929 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 TBC1D1Q86TI0 1168 aaPredicted RBP7.04□□□□□ -1.28
VMP1-215ENST00000592619 FSIP1Q8NA03 581 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 NGDNQ8NEJ9 315 aaKnown RBP7.04□□□□□ -1.28
VMP1-215ENST00000592619 TOR1AIP2Q8NFQ8 470 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 LENG9Q96B70 501 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 RRP36Q96EU6 259 aaKnown RBP7.04□□□□□ -1.28
VMP1-215ENST00000592619 BDH2Q9BUT1 245 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 AGXT2Q9BYV1 514 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 PREBQ9HCU5 417 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 KCTD5Q9NXV2 234 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 AFG3L2Q9Y4W6 797 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 SYCP2Q9BX26 1530 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 MYOM3Q5VTT5 1437 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ZFYVE16Q7Z3T8 1539 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 A0A0G2JLL6 359 aaPredicted RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 VWA3AA6NCI4 1184 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 VWC2LB2RUY7 222 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 YY2O15391 372 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 HNRNPRO43390 633 aaKnown RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 CYP3A4P08684 503 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 DLDP09622 509 aaKnown RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 CREB1P16220 341 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 MCM5P33992 734 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 CLCN2P51788 898 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 RPL15P61313 204 aaKnown RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 SUMO2P61956 95 aaKnown RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 BFSP2Q13515 415 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ZNF484Q5JVG2 852 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 WDR45BQ5MNZ6 344 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ABHD17BQ5VST6 288 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 KIAA0895LQ68EN5 471 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ANO7Q6IWH7 933 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ACSM6Q6P461 480 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 MTHFD1LQ6UB35 978 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 RHOUQ7L0Q8 258 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 CREBRFQ8IUR6 639 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 PTGR2Q8N8N7 351 aaPredicted RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 RP9Q8TA86 221 aaKnown RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 XAGE5Q8WWM1 108 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ST8SIA4Q92187 359 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 EXTL1Q92935 676 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 RFKQ969G6 155 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 PBKQ96KB5 322 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 PRR25Q96S07 402 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 CDK5RAP1Q96SZ6 601 aaKnown RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 OSBPL5Q9H0X9 879 aaPredicted RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 DKK3Q9UBP4 350 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 CFDP1Q9UEE9 299 aaPredicted RBP7.03□□□□□ -1.28
VMP1-215ENST00000592619 TBX20Q9UMR3 447 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 CAMSAP2Q08AD1 1489 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ARHGEF5Q12774 1597 aa7.03□□□□□ -1.28
VMP1-215ENST00000592619 ARHGEF12Q9NZN5 1544 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 CCDC187A0A096LP49 1063 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 CENPVL1A0A0U1RR11 272 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 PIPSLA2A3N6 862 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 F5H0A9 414 aaPredicted RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 K7ESM1 405 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 M0QYT0 321 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 MPPED1O15442 326 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 TMPRSS11DO60235 418 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 HEXIM1O94992 359 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 DDX58O95786 925 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 IFIT1P09914 478 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 HOXA5P20719 270 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 FAM3BP58499 235 aaPredicted RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 PDCLQ13371 301 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 KCTD2Q14681 263 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 FAM187BQ17R55 369 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 NBPF8Q3BBV2 869 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 USP39Q53GS9 565 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 NAA35Q5VZE5 725 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 PTCHD4Q6ZW05 846 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 P3H2Q8IVL5 708 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 TCP11L2Q8N4U5 519 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 SIRT6Q8N6T7 355 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 PNPLA1Q8N8W4 532 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 FAM71DQ8N9W8 422 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 ASB10Q8WXI3 467 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 PIGSQ96S52 555 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 NPAS1Q99742 590 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 PAIP1Q9H074 479 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 PLEKHA2Q9HB19 425 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 ALG13Q9NP73 1137 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 TESQ9UGI8 421 aaKnown RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 FBXO2Q9UK22 296 aaPredicted RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 REREQ9P2R6 1566 aa7.02□□□□□ -1.29
VMP1-215ENST00000592619 INO80Q9ULG1 1556 aaPredicted RBP7.02□□□□□ -1.29
VMP1-215ENST00000592619 ITGAMP11215 1152 aa7.01□□□□□ -1.29
VMP1-215ENST00000592619 ALADP13716 330 aa7.01□□□□□ -1.29
VMP1-215ENST00000592619 ZFXP17010 805 aaPredicted RBP7.01□□□□□ -1.29
VMP1-215ENST00000592619 PSMC2P35998 433 aaKnown RBP7.01□□□□□ -1.29
VMP1-215ENST00000592619 FOLR3P41439 243 aa7.01□□□□□ -1.29
VMP1-215ENST00000592619 TPTEP56180 551 aa7.01□□□□□ -1.29
VMP1-215ENST00000592619 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms