RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 EBF4Q9BQW3 602 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 MROH8Q9H579 483 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 AKT3Q9Y243 479 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 A0A088AWK7 358 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 WDR27A2RRH5 827 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ASB14A6NK59 587 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CCNT2O60583 730 aaKnown RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 BCAT1P54687 386 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 AP2B1P63010 937 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 BNIPLQ7Z465 357 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ANKRD52Q8NB46 1076 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 PPTC7Q8NI37 304 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 DTX3LQ8TDB6 740 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF483Q8TF39 744 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 SNX27Q96L92 541 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 B3GNT5Q9BYG0 378 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 SCOCQ9UIL1 159 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 MAGEA13PA6NCF6 341 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 KIF3CO14782 793 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 PROCP04070 461 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ADORA2AP29274 412 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ACADSBP45954 432 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 SLC1A6P48664 564 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 HARS2P49590 506 aaKnown RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ALDH18A1P54886 795 aaKnown RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 KDSRQ06136 332 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 FAM182AQ5T1J6 154 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 N4BP2L1Q5TBK1 243 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CRYBG2Q8N1P7 616 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CCDC185Q8N715 623 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ATP2A3Q93084 1043 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 SORT1Q99523 831 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 PDGFCQ9NRA1 345 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 FAM49BQ9NUQ9 324 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 MARCOQ9UEW3 520 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 FZD10Q9ULW2 581 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 RBM47A0AV96 593 aaKnown RBP11.94□□□□□ -0.5
ZNF540-210ENST00000592533 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF195O14628 629 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 TPP1O14773 563 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 VTNP04004 478 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 KITP10721 976 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 IGBP1P78318 339 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 PRKG1Q13976 671 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
ZNF540-210ENST00000592533 SOWAHAQ2M3V2 549 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 MAMDC4Q6UXC1 1216 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 DENND5BQ6ZUT9 1274 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 LIMS2Q7Z4I7 341 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 GPC2Q8N158 579 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 TRAPPC9Q96Q05 1148 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 THTPAQ9BU02 230 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 SNX9Q9Y5X1 595 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 UNCXA6NJT0 531 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ITM2AO43736 263 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 TOP3BO95985 862 aaKnown RBP11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ITGA2BP08514 1039 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 MXRA7P84157 204 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 HNRNPDQ14103 355 aaKnown RBP11.94□□□□□ -0.5
ZNF540-210ENST00000592533 Q3C1V9 767 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 PGM2L1Q6PCE3 622 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ALKAL1Q6UXT8 129 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ZCCHC23Q6ZST2 131 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 MAVSQ7Z434 540 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 HSFY1Q96LI6 401 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 RILPQ96NA2 401 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ZDHHC7Q9NXF8 308 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 DNAJC16Q9Y2G8 782 aa11.94□□□□□ -0.5
ZNF540-210ENST00000592533 BUD23O43709 281 aaKnown RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 PRDX6P30041 224 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 TAPT1Q6NXT6 567 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 CLEC4CQ8WTT0 213 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 NT5C3BQ969T7 300 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 ZMAT2Q96NC0 199 aaKnown RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 C16orf70Q9BSU1 422 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 NDE1Q9NXR1 346 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 DLGAP2Q9P1A6 1054 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 IGSF9Q9P2J2 1179 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 PPEF2O14830 753 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 CCDC130P13994 396 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 GOT1P17174 413 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 MATKP42679 507 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 CDK7P50613 346 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 DSG1Q02413 1049 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 SLC25A52Q3SY17 297 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 ERO1BQ86YB8 467 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 UNC5BQ8IZJ1 945 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms