RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ZC3H12AQ5D1E8 599 aaKnown RBP28.27■■■□□ 2.12
SMAD4-213ENST00000591914 ZNF677Q86XU0 584 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 HMGB4Q8WW32 186 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 PRICKLE1Q96MT3 831 aaPredicted RBP28.27■■■□□ 2.12
SMAD4-213ENST00000591914 DUSP15Q9H1R2 295 aaPredicted RBP28.27■■■□□ 2.12
SMAD4-213ENST00000591914 PARD6AQ9NPB6 346 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 ELOVL2Q9NXB9 296 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 CACNA2D2Q9NY47 1150 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 THAP10Q9P2Z0 257 aaPredicted RBP28.27■■■□□ 2.12
SMAD4-213ENST00000591914 DAB1O75553 588 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 ENPP2Q13822 863 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 TMEM215Q68D42 235 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 KIAA0907Q7Z7F0 614 aaPredicted RBP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 NEK11Q8NG66 645 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 UCMAQ8WVF2 138 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 BTN2A3PQ96KV6 586 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 PCMTD1Q96MG8 357 aaPredicted RBP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 SPAG5Q96R06 1193 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 NUCKS1Q9H1E3 243 aaKnown RBP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 FAM204AQ9H8W3 233 aa28.26■■■□□ 2.11
SMAD4-213ENST00000591914 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 BCCIPQ9P287 314 aaKnown RBP eCLIP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 XPO7Q9UIA9 1087 aaKnown RBP28.26■■■□□ 2.11
SMAD4-213ENST00000591914 SMTNL1A8MU46 457 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 TIMM44O43615 452 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 TBL1XO60907 577 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 MOCS2O96007 188 aaPredicted RBP28.25■■■□□ 2.11
SMAD4-213ENST00000591914 SCNN1AP37088 669 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 NOMO3P69849 1222 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 SPEM2Q0P670 501 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 KIAA1211LQ6NV74 962 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 C11orf74Q86VG3 221 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 ERICH1Q86X53 443 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 HJURPQ8NCD3 748 aaPredicted RBP28.25■■■□□ 2.11
SMAD4-213ENST00000591914 SLC20A1Q8WUM9 679 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 C18orf8Q96DM3 657 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 MYEOVQ96EZ4 313 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 DDIT4Q9NX09 232 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 INVSQ9Y283 1065 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 STON1Q9Y6Q2 735 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 SPTBN4Q9H254 2564 aa28.25■■■□□ 2.11
SMAD4-213ENST00000591914 WASH3PC4AMC7 463 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 EPN2O95208 641 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 GABRG2P18507 467 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 GBP1P32455 592 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 P2RY2P41231 377 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 STAT1P42224 750 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 ZNF165P49910 485 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 CDR2Q01850 454 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 E2F5Q15329 346 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 MS4A13Q5J8X5 152 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 WFIKKN2Q8TEU8 576 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 CIPCQ9C0C6 399 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 ABCB8Q9NUT2 735 aa28.24■■■□□ 2.11
SMAD4-213ENST00000591914 KCNU1A8MYU2 1149 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 SLC2A3P11169 496 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 CHRNB2P17787 502 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 NOS2P35228 1153 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 MATKP42679 507 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 ELF2Q15723 593 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 XYLT1Q86Y38 959 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 ZNF557Q8N988 423 aaPredicted RBP28.23■■■□□ 2.11
SMAD4-213ENST00000591914 WFDC5Q8TCV5 224 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 GGA2Q9UJY4 613 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 RAD54BQ9Y620 910 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 DCHS1Q96JQ0 3298 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 PLXND1Q9Y4D7 1925 aa28.23■■■□□ 2.11
SMAD4-213ENST00000591914 RHOBTB1O94844 696 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 CCR1P32246 355 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 IL12RB1P42701 662 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 RPS24P62847 133 aaKnown RBP28.22■■■□□ 2.11
SMAD4-213ENST00000591914 FMO1Q01740 532 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 ZNF234Q14588 700 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 NAA35Q5VZE5 725 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 ADIPOR2Q86V24 386 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 AHI1Q8N157 1196 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 PGBD3Q8N328 593 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 ATP6V0D2Q8N8Y2 350 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 MSANTD4Q8NCY6 345 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 CPA5Q8WXQ8 436 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 SORCS1Q8WY21 1168 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 LMLNQ96KR4 655 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 RRN3Q9NYV6 651 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 USP18Q9UMW8 372 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 SDK1Q7Z5N4 2213 aa28.22■■■□□ 2.11
SMAD4-213ENST00000591914 TYW5A2RUC4 315 aaKnown RBP28.21■■■□□ 2.11
SMAD4-213ENST00000591914 CYP1A1P04798 512 aaPredicted RBP28.21■■■□□ 2.11
SMAD4-213ENST00000591914 PABPC1P11940 636 aaKnown RBP28.21■■■□□ 2.11
SMAD4-213ENST00000591914 BCKDHBP21953 392 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 IQCB1Q15051 598 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 CSRP2Q16527 193 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 MAP7D1Q3KQU3 841 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 OTUD1Q5VV17 481 aaPredicted RBP28.21■■■□□ 2.11
SMAD4-213ENST00000591914 RAP1GAP2Q684P5 730 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 PMS2CLQ68D20 193 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 MFN1Q8IWA4 741 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 FIBINQ8TAL6 211 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 RLN3Q8WXF3 142 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 NT5C3BQ969T7 300 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms