RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 VDRP11473 427 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 CD6P30203 668 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 IL12RB1P42701 662 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 MAPK8P45983 427 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 PMS1P54277 932 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 BCAT1P54687 386 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 ZNF445P59923 1031 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 YWHAEP62258 255 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 LRRC63Q05C16 580 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 HNRNPDQ14103 355 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 STARD3Q14849 445 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 SGO2Q562F6 1265 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 SYCP2LQ5T4T6 812 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 BSPRYQ5W0U4 402 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 TMEM215Q68D42 235 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 LCLAT1Q6UWP7 414 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 KIAA0907Q7Z7F0 614 aaPredicted RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 TMPRSS6Q8IU80 811 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 ELOA2Q8IYF1 753 aaPredicted RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 UBR7Q8N806 425 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 NDRG1Q92597 394 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 HSPA12BQ96MM6 686 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 TSG101Q99816 390 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 ULBP1Q9BZM6 244 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 MKRN2Q9H000 416 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 SLC6A17Q9H1V8 727 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 PRDM16Q9HAZ2 1276 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 LRRC4Q9HBW1 653 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 METTL14Q9HCE5 456 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 CNGB3Q9NQW8 809 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 SUSD2Q9UGT4 822 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 ARMCX3Q9UH62 379 aaPredicted RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 TSPAN16Q9UKR8 245 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 CLEC4EQ9ULY5 219 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 HBS1LQ9Y450 684 aaKnown RBP10.87□□□□□ -0.67
VPS4B-207ENST00000591519 CACNA1EQ15878 2313 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 ATXN2Q99700 1313 aaKnown RBP10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ADAMTS9Q9P2N4 1935 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 O00370 1275 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 OPHN1O60890 802 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 GJB3O75712 270 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 NCAM1P13591 858 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 CD59P13987 128 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 GNSP15586 552 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 TBXAS1P24557 533 aaPredicted RBP10.86□□□□□ -0.67
VPS4B-207ENST00000591519 OXTRP30559 389 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 HARS2P49590 506 aaKnown RBP10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ATXN3P54252 364 aaPredicted RBP10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ZNF234Q14588 700 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 CNGA2Q16280 664 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 MPPE1Q53F39 396 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 WDR45BQ5MNZ6 344 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ADGRF1Q5T601 910 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 TCERG1LQ5VWI1 586 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 FOXR2Q6PJQ5 311 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 UNQ6494/PRO21346Q6UXR6 183 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ANKS1BQ7Z6G8 1248 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 FMNL3Q8IVF7 1028 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 HDDC3Q8N4P3 179 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 MINDY1Q8N5J2 469 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 DDI1Q8WTU0 396 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 SLC35F5Q8WV83 523 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 DHTKD1Q96HY7 919 aaPredicted RBP10.86□□□□□ -0.67
VPS4B-207ENST00000591519 SCNM1Q9BWG6 230 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ZDHHC5Q9C0B5 715 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 CD93Q9NPY3 652 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 FSCN3Q9NQT6 498 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 ABCC13Q9NSE7 274 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 HESX1Q9UBX0 185 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
VPS4B-207ENST00000591519 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 YJEFN3A6XGL0 299 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 METTL12A8MUP2 240 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 C1QTNF9BB2RNN3 333 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 KCNJ18B7U540 433 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 E7ENQ6 273 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 H0Y626 953 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 SYNCRIPO60506 623 aaKnown RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TRIM16O95361 564 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TOP3BO95985 862 aaKnown RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 PAEPP09466 180 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 C1QTNF9P0C862 333 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 HOXD9P28356 352 aaPredicted RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TPMTP51580 245 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 COPAP53621 1224 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 CAMK2GQ13555 558 aaPredicted RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 GOLGA7BQ2TAP0 167 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 PLEKHG6Q3KR16 790 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 DCAF17Q5H9S7 520 aaPredicted RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 MPP7Q5T2T1 576 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 KLHL10Q6JEL2 608 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 MSANTD2Q6P1R3 559 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 KIAA1324Q6UXG2 1013 aaKnown RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 RGL4Q8IZJ4 473 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 LMO3Q8TAP4 145 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms