RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NADSYN1Q6IA69 706 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 ABCA7Q8IZY2 2146 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 ATP6V0D2Q8N8Y2 350 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 CPA5Q8WXQ8 436 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 SORCS1Q8WY21 1168 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 SLC2A13Q96QE2 648 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 DUSP15Q9H1R2 295 aaPredicted RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 HSD3B7Q9H2F3 369 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 ARRDC1-AS1Q9H2J1 176 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 DDIT4Q9NX09 232 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 THAP10Q9P2Z0 257 aaPredicted RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 STON1Q9Y6Q2 735 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 MYO15AQ9UKN7 3530 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 DMDP11532 3685 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 ZNF292O60281 2723 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 VPS13AQ96RL7 3174 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 GOLGA8SH3BPF8 625 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 GFRA2O00451 464 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 SLC2A3P11169 496 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 ABCB4P21439 1286 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 TACR2P21452 398 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 HLA-FP30511 346 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 CDH5P33151 784 aaPredicted RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 NOS2P35228 1153 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 RPS24P62847 133 aaKnown RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 STARD3Q14849 445 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 FILIP1LQ4L180 1135 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 C2CD6Q53TS8 623 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 MPP7Q5T2T1 576 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 RAP1GAP2Q684P5 730 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 KIAA1211LQ6NV74 962 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 OLFML1Q6UWY5 402 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 CHST9Q7L1S5 443 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 C11orf74Q86VG3 221 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 CHSY1Q86X52 802 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 ZDHHC17Q8IUH5 632 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 DHX40Q8IX18 779 aaKnown RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 LGI2Q8N0V4 545 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 CFAP52Q8N1V2 620 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 CARNMT1Q8N4J0 409 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 HJURPQ8NCD3 748 aaPredicted RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 WFIKKN2Q8TEU8 576 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 LOXL4Q96JB6 756 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 BTN2A3PQ96KV6 586 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 GABRG3Q99928 467 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 BPIFA3Q9BQP9 254 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 PARD6AQ9NPB6 346 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
TPM4-212ENST00000590180 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
TPM4-212ENST00000590180 PLA2G4CQ9UP65 541 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 DAAM1Q9Y4D1 1078 aa12.53□□□□□ -0.4
TPM4-212ENST00000590180 CEP250Q9BV73 2442 aa12.52□□□□□ -0.4
TPM4-212ENST00000590180 USP34Q70CQ2 3546 aa12.52□□□□□ -0.4
TPM4-212ENST00000590180 SPAG17Q6Q759 2223 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 A0A1W2PQF6 199 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 SYCE3A1L190 88 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 KCNU1A8MYU2 1149 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 M0QYT0 321 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 NPC1O15118 1278 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 TEX33O43247 280 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 SYNCRIPO60506 623 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 LSM8O95777 96 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 GABRG2P18507 467 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 PTMSP20962 102 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 CCR1P32246 355 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 MATKP42679 507 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 IL12RB1P42701 662 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 JAM2P57087 298 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 CDR2Q01850 454 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 CREB5Q02930 508 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 EIF4HQ15056 248 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 CCDC6Q16204 474 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 TMEM215Q68D42 235 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 SLC26A9Q7LBE3 791 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 APTXQ7Z2E3 356 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 PHLDB2Q86SQ0 1253 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 ZNF677Q86XU0 584 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 MFN1Q8IWA4 741 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 FRMD1Q8N878 549 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 ZNF557Q8N988 423 aaPredicted RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 ZNF397Q8NF99 534 aaPredicted RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 EPS8L1Q8TE68 723 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 CYB5D2Q8WUJ1 264 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 MYEOVQ96EZ4 313 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms