RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CCR1P32246 355 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 CTNNA1P35221 906 aaKnown RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 RFC1P35251 1148 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PBX3P40426 434 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 SSR1P43307 286 aaKnown RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 CHRNA4P43681 627 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 RGS7P49802 495 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 YWHAGP61981 247 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 LMNB2Q03252 620 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 TFDP2Q14188 446 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PPP2R5DQ14738 602 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 DCAF6Q58WW2 860 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 HECTD3Q5T447 861 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 ZFYVE27Q5T4F4 411 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 SEL1L2Q5TEA6 688 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 BSPRYQ5W0U4 402 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 NUGGCQ68CJ6 796 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 SCARA3Q6AZY7 606 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 LILRA6Q6PI73 481 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PRSS55Q6UWB4 352 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 SYT10Q6XYQ8 523 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 FAM183BPQ6ZVS7 135 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 TAS1R1Q7RTX1 841 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 CD163Q86VB7 1156 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 TMEM173Q86WV6 379 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 KATNAL2Q8IYT4 538 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 MICALL1Q8N3F8 863 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 KREMEN2Q8NCW0 462 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 CMASQ8NFW8 434 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 EXD1Q8NHP7 514 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 ZNF417Q8TAU3 575 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 BCL7CQ8WUZ0 217 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 RXFP2Q8WXD0 754 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 MRPS31Q92665 395 aaKnown RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 CENPIQ92674 756 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 BHMTQ93088 406 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 NT5C3BQ969T7 300 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PSMG2Q969U7 264 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 HES6Q96HZ4 224 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 ZNF587Q96SQ5 575 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 MAK16Q9BXY0 300 aaKnown RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PACSIN1Q9BY11 444 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PBX4Q9BYU1 374 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 ULBP1Q9BZM6 244 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 DCLK3Q9C098 648 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 ASAH2Q9NR71 780 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 HAUS2Q9NVX0 235 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 STIM2Q9P246 746 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 FBXW11Q9UKB1 542 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 TTC7AQ9ULT0 858 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 SNX12Q9UMY4 172 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 ZNF510Q9Y2H8 683 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 HBS1LQ9Y450 684 aaKnown RBP7.62□□□□□ -1.19
SMAD4-210ENST00000590061 INSL5Q9Y5Q6 135 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 VWA8A3KMH1 1905 aa7.62□□□□□ -1.19
SMAD4-210ENST00000590061 PTPRDP23468 1912 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 SLC38A8A6NNN8 435 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 C1QTNF9BB2RNN3 333 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 HHLA1C9JL84 531 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 F8W810 466 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 DLL1O00548 723 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 MDM4O15151 490 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 TGM5O43548 720 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 URI1O94763 535 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ENDOD1O94919 500 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 LATS1O95835 1130 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 APOEP02649 317 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 C8AP07357 584 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 USP17L7P0C7H9 530 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 LINC00271P0C7V0 271 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 COMTP21964 271 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ATP5C1P36542 298 aaKnown RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 IDH3AP50213 366 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 RABGGTBP53611 331 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 RNASE9P60153 205 aaKnown RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 DEUP1Q05D60 604 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ITIH3Q06033 890 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 RING1Q06587 406 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 DDR2Q16832 855 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 CC2D1AQ6P1N0 951 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 MSANTD2Q6P1R3 559 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 C8orf86Q6ZUL3 223 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 TMCO2Q7Z6W1 182 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 DNAJB7Q7Z6W7 309 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 NT5DC3Q86UY8 548 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 SLC35F6Q8N357 371 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ZNF557Q8N988 423 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ZMIZ2Q8NF64 920 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 OLIG1Q8TAK6 271 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 RNF34Q969K3 372 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 AZIN2Q96A70 460 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 NTAN1Q96AB6 310 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ARHGEF26Q96DR7 871 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 PGLYRP2Q96PD5 576 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 KCNK16Q96T55 309 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 C17orf80Q9BSJ5 609 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 VN1R3Q9BXE9 311 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 SMOC2Q9H3U7 446 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms