RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 NDRG1Q92597 394 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 CYFIP2Q96F07 1278 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ABCB8Q9NUT2 735 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ZNF510Q9Y2H8 683 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 PCDHA5Q9Y5H7 936 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 BOD1L1Q8NFC6 3051 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 UBR5O95071 2799 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 A0A1W2PR77 199 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 SLC12A8A0AV02 714 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 KIF20AO95235 890 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 DNTTP04053 509 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 C1SP09871 688 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 GLDCP23378 1020 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 GALCP54803 685 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 COG7P83436 770 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 EHHADHQ08426 723 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 E2F4Q16254 413 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 KANSL1Q7Z3B3 1105 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 FAM217AQ8IXS0 508 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 MYO19Q96H55 970 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 SLC2A11Q9BYW1 496 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 CLMPQ9H6B4 373 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 SGK2Q9HBY8 427 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 MARCH2Q9P0N8 246 aa13.35□□□□□ -0.27
PRKCSH-210ENST00000589990 A0A1W2PP55 124 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 C10orf142B7Z368 130 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 TIMM44O43615 452 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 DFNA5O60443 496 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 EXOC3O60645 756 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 CYBBP04839 570 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 RALAP11233 206 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 CD70P32970 193 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 ASIC1P78348 528 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 CLDN10P78369 228 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 SFMBT2Q5VUG0 894 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 MBLAC2Q68D91 279 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 KDM7AQ6ZMT4 941 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 DCBLD1Q8N8Z6 715 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 GANCQ8TET4 914 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 LGMNQ99538 433 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 DCLK3Q9C098 648 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 PABPC3Q9H361 631 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 KBTBD4Q9NVX7 518 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 CLIC5Q9NZA1 410 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 PLA2G4CQ9UP65 541 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 DOCK9Q9BZ29 2069 aa13.34□□□□□ -0.27
PRKCSH-210ENST00000589990 FLNCQ14315 2725 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 MID1O15344 667 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 SDC3O75056 442 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 SIN3BO75182 1162 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 ASS1P00966 412 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 MPOP05164 745 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 CD38P28907 300 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 ACTN2P35609 894 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 PSEN1P49768 467 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 ZBTB16Q05516 673 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 C1orf220Q5T0J3 134 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 PPP1R26Q5T8A7 1209 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 ZNF776Q68DI1 518 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 KIAA0907Q7Z7F0 614 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 TTC9Q92623 222 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 PNPLA8Q9NP80 782 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 GGA2Q9UJY4 613 aa13.33□□□□□ -0.28
PRKCSH-210ENST00000589990 B8ZZF3 427 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 TULP2O00295 520 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 TRIM38O00635 465 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 DLDP09622 509 aaKnown RBP13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 PABPC1P11940 636 aaKnown RBP13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 CD58P19256 250 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 NXPH1P58417 271 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 PPP2CBP62714 309 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 PPP2CAP67775 309 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 KCNC4Q03721 635 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 INCA1Q0VD86 236 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 TRIP4Q15650 581 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 ZACNQ401N2 412 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 MPPE1Q53F39 396 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
PRKCSH-210ENST00000589990 TADA2BQ86TJ2 420 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms