RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 METTL12A8MUP2 240 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 CD44P16070 742 aaKnown RBP16.97■□□□□ 0.31
MBD3-206ENST00000589901 OXTRP30559 389 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 SLC14A1Q13336 389 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 E2F5Q15329 346 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 FNDC3BQ53EP0 1204 aaKnown RBP16.97■□□□□ 0.31
MBD3-206ENST00000589901 RFWD3Q6PCD5 774 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 CHST9Q7L1S5 443 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 ADIPOR2Q86V24 386 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 SCML4Q8N228 414 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 CHCHD4Q8N4Q1 142 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 OR2T3Q8NH03 318 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 CLEC4CQ8WTT0 213 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 SLC35F5Q8WV83 523 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 NUP58Q9BVL2 599 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 TMEM245Q9H330 911 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 METTL14Q9HCE5 456 aaKnown RBP16.97■□□□□ 0.31
MBD3-206ENST00000589901 NFE2L3Q9Y4A8 694 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 PCDHB4Q9Y5E5 795 aa16.97■□□□□ 0.31
MBD3-206ENST00000589901 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 M0QYV0 167 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 PSMA7O14818 248 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 LATS1O95835 1130 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 PAEPP09466 180 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
MBD3-206ENST00000589901 ZNF445P59923 1031 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 CAMK2GQ13555 558 aaPredicted RBP16.96■□□□□ 0.31
MBD3-206ENST00000589901 TRIP6Q15654 476 aaKnown RBP16.96■□□□□ 0.31
MBD3-206ENST00000589901 PTPRNQ16849 979 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 MSANTD2Q6P1R3 559 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 PPM1KQ8N3J5 372 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 WFDC5Q8TCV5 224 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 WFIKKN2Q8TEU8 576 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 NT5C1BQ96P26 610 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 ZDHHC5Q9C0B5 715 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 IL21RQ9HBE5 538 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 EIF2B4Q9UI10 523 aaKnown RBP16.96■□□□□ 0.31
MBD3-206ENST00000589901 GGA2Q9UJY4 613 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.96■□□□□ 0.31
MBD3-206ENST00000589901 PLA2G4CQ9UP65 541 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 MSRB2Q9Y3D2 182 aa16.96■□□□□ 0.31
MBD3-206ENST00000589901 DSPP15924 2871 aaKnown RBP16.96■□□□□ 0.31
MBD3-206ENST00000589901 TMEM8BA6NDV4 472 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 BCAT2O15382 392 aaPredicted RBP16.95■□□□□ 0.3
MBD3-206ENST00000589901 IGLV3-27P01718 113 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 PABPC1P11940 636 aaKnown RBP16.95■□□□□ 0.3
MBD3-206ENST00000589901 ACSL1P33121 698 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 BNC1Q01954 994 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 HNRNPDQ14103 355 aaKnown RBP16.95■□□□□ 0.3
MBD3-206ENST00000589901 CNGA2Q16280 664 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 CCDC40Q4G0X9 1142 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 PIK3R6Q5UE93 754 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 RRAGAQ7L523 313 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 KIAA0907Q7Z7F0 614 aaPredicted RBP16.95■□□□□ 0.3
MBD3-206ENST00000589901 NAXDQ8IW45 347 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 AHI1Q8N157 1196 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.95■□□□□ 0.3
MBD3-206ENST00000589901 LMO3Q8TAP4 145 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 IRGQQ8WZA9 623 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 DHTKD1Q96HY7 919 aaPredicted RBP16.95■□□□□ 0.3
MBD3-206ENST00000589901 TIGD1Q96MW7 591 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 LHX5Q9H2C1 402 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 MAN1B1Q9UKM7 699 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 SLCO1B1Q9Y6L6 691 aa16.95■□□□□ 0.3
MBD3-206ENST00000589901 H0Y626 953 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 PMM2O15305 246 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 TBL1XO60907 577 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 TRIM16O95361 564 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 LTFP02788 710 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 SLC6A4P31645 630 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 CD70P32970 193 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 RDXP35241 583 aaKnown RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 STIM1Q13586 685 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 ZNF423Q2M1K9 1284 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 FAM133BQ5BKY9 247 aaKnown RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 MBLAC2Q68D91 279 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 KLHL10Q6JEL2 608 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 TTI2Q6NXR4 508 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 ARHGEF19Q8IW93 802 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 C1orf216Q8TAB5 229 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 ZCCHC14Q8WYQ9 949 aaKnown RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 SNX19Q92543 992 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 GTPBP4Q9BZE4 634 aaKnown RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 MIS12Q9H081 205 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 C6orf106Q9H6K1 298 aaPredicted RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 GAREM1Q9H706 876 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 PRSS16Q9NQE7 514 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
MBD3-206ENST00000589901 PCDHB9Q9Y5E1 797 aa16.94■□□□□ 0.3
MBD3-206ENST00000589901 ACSL4O60488 711 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 FYNP06241 537 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 DLDP09622 509 aaKnown RBP16.93■□□□□ 0.3
MBD3-206ENST00000589901 BMP6P22004 513 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 SLC11A2P49281 568 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 TBX4P57082 545 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 MPP7Q5T2T1 576 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 NADSYN1Q6IA69 706 aa16.93■□□□□ 0.3
MBD3-206ENST00000589901 UNC45BQ8IWX7 931 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms