RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TACR2P21452 398 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 COMTP21964 271 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 GJC1P36383 396 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 SCAPQ12770 1279 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 NR1H3Q13133 447 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 EML3Q32P44 896 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 BOLA3Q53S33 107 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 FAM133BQ5BKY9 247 aaKnown RBP14.1□□□□□ -0.15
VMP1-210ENST00000589823 MS4A13Q5J8X5 152 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 ZFYVE27Q5T4F4 411 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 PIK3R6Q5UE93 754 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 LRRC31Q6UY01 552 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 PSTKQ8IV42 348 aaKnown RBP14.1□□□□□ -0.15
VMP1-210ENST00000589823 FAM217AQ8IXS0 508 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 ADGRG2Q8IZP9 1017 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 GJD3Q8N144 294 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 CPA6Q8N4T0 437 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 CSGALNACT1Q8TDX6 532 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 TEKT4Q8WW24 435 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 ASIC4Q96FT7 647 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 ALS2CR12Q96Q35 445 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 PEBP4Q96S96 227 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 FAM83CQ9BQN1 747 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 SNRNP25Q9BV90 132 aaKnown RBP14.1□□□□□ -0.15
VMP1-210ENST00000589823 OSBPL2Q9H1P3 480 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 ANLNQ9NQW6 1124 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 SPHK2Q9NRA0 654 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 TMPRSS4Q9NRS4 437 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 AP4E1Q9UPM8 1137 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 HYOU1Q9Y4L1 999 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 HS3ST4Q9Y661 456 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 TRDMT1O14717 391 aaKnown RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 TSPAN3O60637 253 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 ADH1CP00326 375 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 SRFP11831 508 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 TNNT1P13805 278 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 ARSAP15289 507 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 TCF4P15884 667 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 VCPP55072 806 aaKnown RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 PFKPQ01813 784 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 SLC25A11Q02978 314 aaKnown RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 RUNX3Q13761 415 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 RABGAP1LQ5R372 815 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 RFWD3Q6PCD5 774 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 TPGS1Q6ZTW0 290 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 CPNE8Q86YQ8 564 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 RHOT1Q8IXI2 618 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 LGI2Q8N0V4 545 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 CCAR2Q8N163 923 aaKnown RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 HSPH1Q92598 858 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 C1orf74Q96LT6 269 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 GOLPH3Q9H4A6 298 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 DHX35Q9H5Z1 703 aaKnown RBP14.09□□□□□ -0.15
VMP1-210ENST00000589823 GPATCH2LQ9NWQ4 482 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 OR12D3Q9UGF7 316 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 AMFRQ9UKV5 643 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 SORCS3Q9UPU3 1222 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 CAPN6Q9Y6Q1 641 aa14.09□□□□□ -0.15
VMP1-210ENST00000589823 I6L893 689 aaPredicted RBP14.08□□□□□ -0.16
VMP1-210ENST00000589823 RARAP10276 462 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 ADH5P11766 374 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 IL1R2P27930 398 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 SLC6A4P31645 630 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 GGCXP38435 758 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 TAS2R40P59535 323 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 TNK2Q07912 1038 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 AUHQ13825 339 aaKnown RBP14.08□□□□□ -0.16
VMP1-210ENST00000589823 DHCR24Q15392 516 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 ANO4Q32M45 955 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 ITPRIPL2Q3MIP1 535 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 MPPE1Q53F39 396 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 ODF2Q5BJF6 829 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 KCNT1Q5JUK3 1230 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 LY6G5CQ5SRR4 150 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 LRRC38Q5VT99 294 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 CYP4V2Q6ZWL3 525 aaPredicted RBP14.08□□□□□ -0.16
VMP1-210ENST00000589823 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 POLNQ7Z5Q5 900 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 LRRC57Q8N9N7 239 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 TRIM58Q8NG06 486 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 DDI1Q8WTU0 396 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 DNASE1L2Q92874 299 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 TMA16Q96EY4 203 aaKnown RBP14.08□□□□□ -0.16
VMP1-210ENST00000589823 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
VMP1-210ENST00000589823 EPAS1Q99814 870 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 PRMT1Q99873 361 aaKnown RBP14.08□□□□□ -0.16
VMP1-210ENST00000589823 BBS2Q9BXC9 721 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 ECT2Q9H8V3 914 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 TRPV5Q9NQA5 729 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 HPS4Q9NQG7 708 aa14.08□□□□□ -0.16
VMP1-210ENST00000589823 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.08□□□□□ -0.16
VMP1-210ENST00000589823 VANGL2Q9ULK5 521 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms