RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 SYNCQ9H7C4 482 aa21.53■■□□□ 1.04
MBD3-205ENST00000589064 ABCB8Q9NUT2 735 aa21.53■■□□□ 1.04
MBD3-205ENST00000589064 TMEM63CQ9P1W3 806 aa21.53■■□□□ 1.04
MBD3-205ENST00000589064 XPO7Q9UIA9 1087 aaKnown RBP21.53■■□□□ 1.04
MBD3-205ENST00000589064 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.52■■□□□ 1.04
MBD3-205ENST00000589064 FAM170AA1A519 330 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 GDF9O60383 454 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 GLI1P08151 1106 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 NDUFV2P19404 249 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 MPLP40238 635 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 COPB1P53618 953 aaKnown RBP21.52■■□□□ 1.04
MBD3-205ENST00000589064 SNX16P57768 344 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 CDK17Q00537 523 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 ZNF234Q14588 700 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 EIF4HQ15056 248 aaKnown RBP21.52■■□□□ 1.04
MBD3-205ENST00000589064 PLA2G2CQ5R387 149 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 FKBP15Q5T1M5 1219 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 IRX2Q9BZI1 471 aaPredicted RBP21.52■■□□□ 1.04
MBD3-205ENST00000589064 FAM207AQ9NSI2 230 aaPredicted RBP21.52■■□□□ 1.04
MBD3-205ENST00000589064 ASNSD1Q9NWL6 643 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 CALCOCO1Q9P1Z2 691 aa21.52■■□□□ 1.04
MBD3-205ENST00000589064 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 BCLAF3A2AJT9 711 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 NPC1O15118 1278 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 CAVIN2O95810 425 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 IGLV3-25P01717 112 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 APOEP02649 317 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 CDK11BP21127 795 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 DHPSP49366 369 aaPredicted RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 RPS24P62847 133 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 SLC6A3Q01959 620 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 ARID5AQ03989 594 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 EIF4EBP2Q13542 120 aaPredicted RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 ENPP2Q13822 863 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 OLFML1Q6UWY5 402 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 CHST9Q7L1S5 443 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 NOP9Q86U38 636 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 TMEFF1Q8IYR6 380 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 TMEM35BQ8NCS4 154 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 WFDC5Q8TCV5 224 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 DDX1Q92499 740 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 PRICKLE1Q96MT3 831 aaPredicted RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 LIMA1Q9UHB6 759 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 GGA2Q9UJY4 613 aa21.52■■□□□ 1.03
MBD3-205ENST00000589064 CDV3Q9UKY7 258 aaKnown RBP21.52■■□□□ 1.03
MBD3-205ENST00000589064 KIAA1549LQ6ZVL6 1849 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 SYNJ2BP-COX16A0A087WUM0 186 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 F8VZ95 297 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 HSF2BPO75031 334 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 PABPC1P11940 636 aaKnown RBP21.51■■□□□ 1.03
MBD3-205ENST00000589064 SDHBP21912 280 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 ATXN1P54253 815 aaKnown RBP21.51■■□□□ 1.03
MBD3-205ENST00000589064 POLR2FP61218 127 aaKnown RBP21.51■■□□□ 1.03
MBD3-205ENST00000589064 TYRO3Q06418 890 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 STARD3Q14849 445 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 NCAPHQ15003 741 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 FUT11Q495W5 492 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 MS4A13Q5J8X5 152 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 RNF43Q68DV7 783 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 LPCAT2Q7L5N7 544 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 KIAA0907Q7Z7F0 614 aaPredicted RBP21.51■■□□□ 1.03
MBD3-205ENST00000589064 ADIPOR2Q86V24 386 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 CFAP52Q8N1V2 620 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■□□□□ 10.6
MBD3-205ENST00000589064 C12orf50Q8NA57 414 aaPredicted RBP21.51■■□□□ 1.03
MBD3-205ENST00000589064 HJURPQ8NCD3 748 aaPredicted RBP21.51■■□□□ 1.03
MBD3-205ENST00000589064 WFIKKN2Q8TEU8 576 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 CYB5D2Q8WUJ1 264 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 MRGPRX1Q96LB2 322 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 FAM204AQ9H8W3 233 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 NLRC4Q9NPP4 1024 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 VPS45Q9NRW7 570 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.51■■□□□ 1.038e-11■■■■□ 21.9
MBD3-205ENST00000589064 DDIT4Q9NX09 232 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 COX16Q9P0S2 106 aa21.51■■□□□ 1.03
MBD3-205ENST00000589064 EPHB6O15197 1021 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 FOXD2O60548 495 aaPredicted RBP21.5■■□□□ 1.03
MBD3-205ENST00000589064 CD70P32970 193 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 CDH5P33151 784 aaPredicted RBP21.5■■□□□ 1.03
MBD3-205ENST00000589064 E2F5Q15329 346 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 AASDHQ4L235 1098 aaPredicted RBP21.5■■□□□ 1.03
MBD3-205ENST00000589064 DGLUCYQ7Z3D6 616 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 LGI2Q8N0V4 545 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 DEFB119Q8N690 84 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 ANKRD20A12PQ8NF67 263 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 RNF34Q969K3 372 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 BTN2A3PQ96KV6 586 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 RXFP3Q9NSD7 469 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 SLC12A6Q9UHW9 1150 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 PLA2G4CQ9UP65 541 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 SIK3Q9Y2K2 1263 aa21.5■■□□□ 1.03
MBD3-205ENST00000589064 LRRC10BA6NIK2 292 aa21.49■■□□□ 1.03
MBD3-205ENST00000589064 SYNCRIPO60506 623 aaKnown RBP21.49■■□□□ 1.03
MBD3-205ENST00000589064 GFPT2O94808 682 aa21.49■■□□□ 1.03
MBD3-205ENST00000589064 MMEP08473 750 aa21.49■■□□□ 1.03
MBD3-205ENST00000589064 PRKCHP24723 683 aa21.49■■□□□ 1.03
MBD3-205ENST00000589064 RNASE9P60153 205 aaKnown RBP21.49■■□□□ 1.03
MBD3-205ENST00000589064 SYCP1Q15431 976 aa21.49■■□□□ 1.03
MBD3-205ENST00000589064 RAP1GAP2Q684P5 730 aa21.49■■□□□ 1.03
MBD3-205ENST00000589064 MBLAC2Q68D91 279 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms