RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MLF2Q15773 248 aaPredicted RBP19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 MS4A13Q5J8X5 152 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 SCYL2Q6P3W7 929 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 KIAA1328Q86T90 577 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 CHSY1Q86X52 802 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 EDAQ92838 391 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 PRICKLE1Q96MT3 831 aaPredicted RBP19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 SNX10Q9Y5X0 201 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 HS3ST4Q9Y661 456 aa19.66■□□□□ 0.74
CLPTM1-209ENST00000588855 TECTAO75443 2155 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 F5P12259 2224 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 A0A0U1RQJ8 604 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 KRBA1A5PL33 1030 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 NEDD8-MDP1E9PL57 170 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 LRCH4O75427 683 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 RNF8O76064 485 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 TACR2P21452 398 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 CTHP32929 405 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 NR1H3Q13133 447 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 PIGHQ14442 188 aaPredicted RBP19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 TCEAL1Q15170 157 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 ANO4Q32M45 955 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 TPRG1Q6ZUI0 275 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 CPNE8Q86YQ8 564 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 NIPA2Q8N8Q9 360 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 ATRIPQ8WXE1 791 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 PEBP4Q96S96 227 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 PRMT1Q99873 361 aaKnown RBP19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 BBS2Q9BXC9 721 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 LACRTQ9GZZ8 138 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 PLK2Q9NYY3 685 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 MARK1Q9P0L2 795 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 ADGRG1Q9Y653 693 aa19.65■□□□□ 0.74
CLPTM1-209ENST00000588855 SPECC1L-ADORA2AF8WAN1 911 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 TNFRSF10AO00220 468 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 HOXC11O43248 304 aaPredicted RBP19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 NRDCO43847 1150 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 ALADP13716 330 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 ADRA1BP35368 520 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 GAD2Q05329 585 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 SIGLEC14Q08ET2 396 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 CCDC173Q0VFZ6 552 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 ACAP1Q15027 740 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 ARL13BQ3SXY8 428 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 FYB2Q5VWT5 728 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 NAIF1Q69YI7 327 aaPredicted RBP19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 TXNDC11Q6PKC3 985 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 LGI2Q8N0V4 545 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 SIX5Q8N196 739 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 NTAN1Q96AB6 310 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 DDX50Q9BQ39 737 aaKnown RBP19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 SIK2Q9H0K1 926 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 KCNF1Q9H3M0 494 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 PCSK1NQ9UHG2 260 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 SALL4Q9UJQ4 1053 aa19.64■□□□□ 0.73
CLPTM1-209ENST00000588855 A0A0A6YYK5 440 aaPredicted RBP19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 SHISA7A6NL88 538 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 TMEM110-MUSTN1A8MSY1 372 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 PJA2O43164 708 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 PROSCO94903 275 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 TYRP14679 529 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 TCF4P15884 667 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 MIPP30301 263 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 MTA1Q13330 715 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 MESDQ14696 234 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 CYP4V2Q6ZWL3 525 aaPredicted RBP19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 C12orf40Q86WS4 652 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 DDI1Q8WTU0 396 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 ZNF830Q96NB3 372 aaPredicted RBP19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 HAPLN3Q96S86 360 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 MAGEB5Q9BZ81 275 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 C8orf33Q9H7E9 229 aaPredicted RBP19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 DUSP10Q9Y6W6 482 aa19.63■□□□□ 0.73
CLPTM1-209ENST00000588855 DOCK4Q8N1I0 1966 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 F5H5T6 163 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 PI4K2BG5E9Z4 385 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 PENKP01210 267 aaPredicted RBP19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 CYBBP04839 570 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 PCK1P35558 622 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 OPRD1P41143 372 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 NOP2P46087 812 aaKnown RBP19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 HADHBP55084 474 aaKnown RBP19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 SCAPQ12770 1279 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 AUHQ13825 339 aaKnown RBP19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 MPPE1Q53F39 396 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 FBXL22Q6P050 247 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 SLFN11Q7Z7L1 901 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 C14orf80Q86SX3 495 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 RALGPS2Q86X27 583 aaPredicted RBP19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 NAT16Q8N8M0 369 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 PPP1R9BQ96SB3 815 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 TRIM10Q9UDY6 481 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 VANGL2Q9ULK5 521 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 FZD10Q9ULW2 581 aa19.62■□□□□ 0.73
CLPTM1-209ENST00000588855 PRPSAP2O60256 369 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 TBL1XO60907 577 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 GLULP15104 373 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 CD72P21854 359 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 HOXD9P28356 352 aaPredicted RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 MLLT6P55198 1093 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms