RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ADH5P11766 374 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 TCEAL1Q15170 157 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 TXNDC11Q6PKC3 985 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 PHLDB2Q86SQ0 1253 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 SUGP1Q8IWZ8 645 aaKnown RBP20.91■□□□□ 0.94
ATG4D-208ENST00000588667 PJA1Q8NG27 643 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 SELENOOQ9BVL4 669 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 OSBPL6Q9BZF3 934 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 FOXQ1Q9C009 403 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 STOML2Q9UJZ1 356 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 TCRBV5S1A1TA0A578 114 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 HOXC11O43248 304 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-208ENST00000588667 APOEP02649 317 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 KRT3P12035 628 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 AOC1P19801 751 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 RRM1P23921 792 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 SLC11A2P49281 568 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 CLCN5P51795 746 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 GAD2Q05329 585 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 TUBB2AQ13885 445 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 UBXN2BQ14CS0 331 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 GAB4Q2WGN9 574 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 SLC25A52Q3SY17 297 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 OTUD1Q5VV17 481 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-208ENST00000588667 ASTLQ6HA08 431 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-208ENST00000588667 TRNP1Q6NT89 227 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 DNAJC24Q6P3W2 148 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 TMEM25Q86YD3 366 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 CPXM2Q8N436 756 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 SLC35G2Q8TBE7 412 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 EXOC4Q96A65 974 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 AZIN2Q96A70 460 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 ZNF653Q96CK0 615 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 PGAP3Q96FM1 320 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-208ENST00000588667 LRFN3Q9BTN0 628 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 TUBB2BQ9BVA1 445 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 TMEM51Q9NW97 253 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 MARK1Q9P0L2 795 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 KMT2EQ8IZD2 1858 aa20.9■□□□□ 0.94
ATG4D-208ENST00000588667 M0QYT0 321 aa20.89■□□□□ 0.94
ATG4D-208ENST00000588667 SLC2A3P11169 496 aa20.89■□□□□ 0.94
ATG4D-208ENST00000588667 TARSP26639 723 aaKnown RBP20.89■□□□□ 0.94
ATG4D-208ENST00000588667 SULT1E1P49888 294 aa20.89■□□□□ 0.94
ATG4D-208ENST00000588667 EMC1Q8N766 993 aa20.89■□□□□ 0.94
ATG4D-208ENST00000588667 ARHGEF26Q96DR7 871 aa20.89■□□□□ 0.94
ATG4D-208ENST00000588667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.89■□□□□ 0.94
ATG4D-208ENST00000588667 SIGLEC16A6NMB1 481 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 TRDMT1O14717 391 aaKnown RBP20.89■□□□□ 0.93
ATG4D-208ENST00000588667 PALMO75781 387 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 CCR1P32246 355 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 EIF2DP41214 584 aaKnown RBP20.89■□□□□ 0.93
ATG4D-208ENST00000588667 VCPP55072 806 aaKnown RBP20.89■□□□□ 0.93
ATG4D-208ENST00000588667 HADHBP55084 474 aaKnown RBP20.89■□□□□ 0.93
ATG4D-208ENST00000588667 NME3Q13232 169 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 ANO4Q32M45 955 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 ZC3H12AQ5D1E8 599 aaKnown RBP20.89■□□□□ 0.93
ATG4D-208ENST00000588667 ADGRF1Q5T601 910 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 SYCE1Q8N0S2 351 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 ZNF687Q8N1G0 1237 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 TPCN2Q8NHX9 752 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 JOSD2Q8TAC2 188 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 TBCBQ99426 244 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 BBS2Q9BXC9 721 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 L2HGDHQ9H9P8 463 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 CTTNBP2NLQ9P2B4 639 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 NDRG2Q9UN36 371 aaKnown RBP20.89■□□□□ 0.93
ATG4D-208ENST00000588667 SIT1Q9Y3P8 196 aa20.89■□□□□ 0.93
ATG4D-208ENST00000588667 SYNJ2BP-COX16A0A087WUM0 186 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 C2CD4BA6NLJ0 364 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 FAM170BA6NMN3 283 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 ACSL4O60488 711 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 GJB6O95452 261 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 F9P00740 461 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 CYP1A2P05177 515 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 TFE3P19532 575 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-208ENST00000588667 PPP2R5DQ14738 602 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 PON2Q15165 354 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 TPGS1Q6ZTW0 290 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 CCDC105Q8IYK2 499 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 RXFP2Q8WXD0 754 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 CFAP57Q96MR6 1250 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 P2RY13Q9BPV8 354 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 ADAM33Q9BZ11 813 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 COX16Q9P0S2 106 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 CALCOCO1Q9P1Z2 691 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 UVRAGQ9P2Y5 699 aa20.88■□□□□ 0.93
ATG4D-208ENST00000588667 MTF2Q9Y483 593 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-208ENST00000588667 GRID2IPA4D2P6 1211 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 NEDD8-MDP1E9PL57 170 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 PDGFRAP16234 1089 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 SDC4P31431 198 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 RFC1P35251 1148 aaPredicted RBP20.87■□□□□ 0.93
ATG4D-208ENST00000588667 OPRD1P41143 372 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 DEUP1Q05D60 604 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 MTA1Q13330 715 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 TMEM196Q5HYL7 178 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 PPP1R15BQ5SWA1 713 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 PLEKHA7Q6IQ23 1121 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 BNIPLQ7Z465 357 aa20.87■□□□□ 0.93
ATG4D-208ENST00000588667 CD101Q93033 1021 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms