RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 MCUQ8NE86 351 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 MAGEB18Q96M61 343 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 PIGVQ9NUD9 493 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 DTLQ9NZJ0 730 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 MPP6Q9NZW5 540 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC17A6Q9P2U8 582 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 CDH9Q9ULB4 789 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 DOCK3Q8IZD9 2030 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 MPP2Q14168 576 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 PCBP1Q15365 356 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 UBXN11Q5T124 520 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 VSTM1Q6UX27 236 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 ARID3BQ8IVW6 561 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TP53INP2Q8IXH6 220 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 DCP1BQ8IZD4 617 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TMEM86AQ8N2M4 240 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 PQLC3Q8N755 202 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 CKAP2Q8WWK9 683 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 VRTNQ9H8Y1 702 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 CPSF2Q9P2I0 782 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 GIT1Q9Y2X7 761 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 UGT1A9O60656 530 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 NCF2P19878 526 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 COG7P83436 770 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 HSP90AA5PQ58FG0 334 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TRMT10BQ6PF06 316 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 AGMOQ6ZNB7 445 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 IGDCC3Q8IVU1 814 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 GPATCH11Q8N954 259 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 SGF29Q96ES7 293 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 RPRD1AQ96P16 312 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 SHCBP1LQ9BZQ2 653 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 UGT1A7Q9HAW7 530 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 UGT1A10Q9HAW8 530 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 UGT1A8Q9HAW9 530 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 HMX1Q9NP08 348 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 EFR3BQ9Y2G0 817 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 A0A0A0MRY4 1105 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 F9P00740 461 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 POLBP06746 335 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 DNAJB2P25686 324 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TARSP26639 723 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 GRK4P32298 578 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 AVPR1AP37288 418 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TUBP50607 506 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 TUSC3Q13454 348 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 PRPF39Q86UA1 669 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 CRLF3Q8IUI8 442 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 CCNYL1Q8N7R7 359 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 ACSS3Q9H6R3 686 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC39A10Q9ULF5 831 aa12.81□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 TBKBP1A7MCY6 615 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 CHRNA1P02708 482 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 SNCBQ16143 134 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 MFSD5Q6N075 450 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 MPP5Q8N3R9 675 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 CAPNS2Q96L46 248 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 MECRQ9BV79 373 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 SMAPO00193 183 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 SNX3O60493 162 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 DAB1O75553 588 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 FDFT1P37268 417 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 GPX6P59796 221 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 RPL10AP62906 217 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 DRICH1Q6PGQ1 229 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 SMOQ99835 787 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 TXLNGYQ9BZA5 131 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC40A1Q9NP59 571 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 RBM22Q9NW64 420 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 RNF186Q9NXI6 227 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 MYO7AQ13402 2215 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 MBLAC1A4D2B0 266 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 RPSAP08865 295 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 ESRRAP11474 423 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 NFKB1P19838 968 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 ELF1P32519 619 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 PTPN9P43378 593 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 GLRBP48167 497 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 RAB27AP51159 221 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 DAOAP59103 153 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 NOGQ13253 232 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 MAPRE1Q15691 268 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 GPRIN1Q7Z2K8 1008 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 NAT8LQ8N9F0 302 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 GSDMBQ8TAX9 411 aa12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 ZNF75CPQ92670 426 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 SRPK1Q96SB4 655 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-208ENST00000585799 IARS2Q9NSE4 1012 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms