RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 TJP2Q9UDY2 1190 aa13.67□□□□□ -0.22
ERBB2-220ENST00000584684 STON1Q9Y6Q2 735 aa13.67□□□□□ -0.22
ERBB2-220ENST00000584684 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 CAPN9O14815 690 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 ZBTB24O43167 697 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 TSPAN3O60637 253 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 ZNF217O75362 1048 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 TRUB2O95900 331 aaKnown RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 APOEP02649 317 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 TPM2P07951 284 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 PNMA6AP0CW24 399 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 CYP11B1P15538 503 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 NDUFV2P19404 249 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 SLC6A4P31645 630 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 SCNN1AP37088 669 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 DPP6P42658 865 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 WASP42768 502 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 MTA1Q13330 715 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 STARD3Q14849 445 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 PTPN20Q4JDL3 420 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 METTL3Q86U44 580 aaKnown RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 AHI1Q8N157 1196 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 BTN2A3PQ96KV6 586 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 RTKNQ9BST9 563 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 LSM14BQ9BX40 385 aaKnown RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 GANQ9H2C0 597 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 MBD1Q9UIS9 605 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-220ENST00000584684 GGA2Q9UJY4 613 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 SPTBN2O15020 2390 aa13.66□□□□□ -0.22
ERBB2-220ENST00000584684 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 SLC30A4O14863 429 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 DAB1O75553 588 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 ERBB2P04626 1255 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 SLC2A3P11169 496 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 PABPC1P11940 636 aaKnown RBP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 ZNF18P17022 549 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 HOXD12P35452 270 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 IL12RB1P42701 662 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 GABRB2P47870 512 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 SGSHP51688 502 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 CDK17Q00537 523 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 ZNF234Q14588 700 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 TAF5Q15542 800 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 FUT11Q495W5 492 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 MS4A13Q5J8X5 152 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 RFWD3Q6PCD5 774 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 SLC36A4Q6YBV0 504 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 FAM183BPQ6ZVS7 135 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 LPCAT2Q7L5N7 544 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 ADIPOR2Q86V24 386 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 C12orf50Q8NA57 414 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 TMEM35BQ8NCS4 154 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 ADAM32Q8TC27 787 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 EPS8L1Q8TE68 723 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 DDX1Q92499 740 aaKnown RBP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 CIPCQ9C0C6 399 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 ABCB8Q9NUT2 735 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 LIMA1Q9UHB6 759 aaKnown RBP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
ERBB2-220ENST00000584684 CNOT1A5YKK6 2376 aaKnown RBP13.65□□□□□ -0.22
ERBB2-220ENST00000584684 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 LRRC10BA6NIK2 292 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 LGALS16A8MUM7 142 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 TBL1XO60907 577 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 CAVIN2O95810 425 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 JAM2P57087 298 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 PITX1P78337 314 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-220ENST00000584684 CREB5Q02930 508 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 SF3A2Q15428 464 aaKnown RBP13.64□□□□□ -0.23
ERBB2-220ENST00000584684 DCAF6Q58WW2 860 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 FKBP15Q5T1M5 1219 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 PEAR1Q5VY43 1037 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-220ENST00000584684 DGLUCYQ7Z3D6 616 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 CYP2U1Q7Z449 544 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 ZNF677Q86XU0 584 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 PGBD3Q8N328 593 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 FIBINQ8TAL6 211 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 RLN3Q8WXF3 142 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
ERBB2-220ENST00000584684 VPS16Q9H269 839 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 TMEM245Q9H330 911 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 RRN3Q9NYV6 651 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 USP36Q9P275 1121 aaKnown RBP13.64□□□□□ -0.23
ERBB2-220ENST00000584684 SIK3Q9Y2K2 1263 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 RAD54BQ9Y620 910 aa13.64□□□□□ -0.23
ERBB2-220ENST00000584684 CEP192Q8TEP8 1941 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms