RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-210	ENST00000584340	PPP1R2P3	Q6NXS1	205 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	TPGS1	Q6ZTW0	290 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	UNC45B	Q8IWX7	931 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	CPA6	Q8N4T0	437 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	FBXL6	Q8N531	539 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	MSANTD4	Q8NCY6	345 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	TTC16	Q8NEE8	873 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	FAM3C	Q92520	227 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	GOLGA1	Q92805	767 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	IGSF8	Q969P0	613 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	BTN2A3P	Q96KV6	586 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	C1orf74	Q96LT6	269 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	MCEE	Q96PE7	176 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	PARVA	Q9NVD7	372 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	CNOT8	Q9UFF9	292 aa	Known RBP	11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	SNX10	Q9Y5X0	201 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	HS3ST4	Q9Y661	456 aa		11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	MUC22	E2RYF6	1773 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD11-210	ENST00000584340	IGLV3-10	A0A075B6K4	115 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	SOWAHD	A6NJG2	315 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	DRGX	A6NNA5	263 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	PRRT4	C9JH25	899 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FAM72C	H0Y354	149 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	MAN2B1	O00754	1011 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	TULP3	O75386	442 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	MTA2	O94776	668 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	EGF	P01133	1207 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	MYBL1	P10243	752 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	TYR	P14679	529 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	GPD1	P21695	349 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	HOXC13	P31276	330 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	CCR1	P32246	355 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	ADRA1B	P35368	520 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	CHKA	P35790	457 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	KIR2DL1	P43626	348 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	RPS24	P62847	133 aa	Known RBP	11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	ATP11A	P98196	1134 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	GAD2	Q05329	585 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	SCAP	Q12770	1279 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	SEMA3B	Q13214	749 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	NME3	Q13232	169 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	PON2	Q15165	354 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	BRMS1L	Q5PSV4	323 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	MPP7	Q5T2T1	576 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FAM72A	Q5TYM5	149 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	DAB2IP	Q5VWQ8	1189 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FAM72D	Q6L9T8	149 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FBXL22	Q6P050	247 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	DNAJC24	Q6P3W2	148 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	PKN3	Q6P5Z2	889 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	ZNF852	Q6ZMS4	543 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	MAMSTR	Q6ZN01	415 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FAM72B	Q86X60	149 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	CCDC185	Q8N715	623 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	OR52K2	Q8NGK3	314 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	CSGALNACT1	Q8TDX6	532 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	PBXIP1	Q96AQ6	731 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	ZNF653	Q96CK0	615 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	ALG14	Q96F25	216 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	MSANTD3	Q96H12	275 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	PEBP4	Q96S96	227 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	CNPY3	Q9BT09	278 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	SELENOO	Q9BVL4	669 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	IRX2	Q9BZI1	471 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	TKTL2	Q9H0I9	626 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FAM204A	Q9H8W3	233 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	CD248	Q9HCU0	757 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	RBM12	Q9NTZ6	932 aa	Known RBP	11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	PLK2	Q9NYY3	685 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	SALL4	Q9UJQ4	1053 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	LSM7	Q9UK45	103 aa	Known RBP	11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	FBXL21	Q9UKT6	434 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	STAP1	Q9ULZ2	295 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	TFR2	Q9UP52	801 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340	SLC27A6	Q9Y2P4	619 aa		11.14	□□□□□ -0.63
PSMD11-210	ENST00000584340		A0A0U1RQJ8	604 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	FAM170B	A6NMN3	283 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	TSPAN3	O60637	253 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	LRCH4	O75427	683 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	ADH1C	P00326	375 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	F9	P00740	461 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	DCN	P07585	359 aa	Known RBP	11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	TMEM253	P0C7T8	217 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	ABCB4	P21439	1286 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	TACR2	P21452	398 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	IL1R2	P27930	398 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	HLA-F	P30511	346 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	AVPR2	P30518	371 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	GBP1	P32455	592 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	RDX	P35241	583 aa	Known RBP	11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	GGCX	P38435	758 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	RPS9	P46781	194 aa	Known RBP	11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	NRG1	Q02297	640 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	DEUP1	Q05D60	604 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	AUH	Q13825	339 aa	Known RBP	11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	FSCB	Q5H9T9	825 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	EMC10	Q5UCC4	262 aa		11.13	□□□□□ -0.63
PSMD11-210	ENST00000584340	RAP1GAP2	Q684P5	730 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms