RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SMN1Q16637 294 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 SPPL3Q8TCT6 385 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 GLMPQ8WWB7 406 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 THAP4Q8WY91 577 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 AKAP1Q92667 903 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 TRMT61AQ96FX7 289 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 ARPP21Q9UBL0 812 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 LZTS1Q9Y250 596 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 HEMK1Q9Y5R4 338 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 COL11A2P13942 1736 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 ARHGEF17Q96PE2 2063 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 LRRC3CA6NJW4 275 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 H7C1Q1 480 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 C1QL1O75973 258 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 KAT7O95251 611 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 NUDT3O95989 172 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 IGLV2-14P01704 120 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 TAS2R50P59544 299 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 SLC14A1Q13336 389 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 LARS2Q15031 903 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 LRRC24Q50LG9 513 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 CC2D1BQ5T0F9 858 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 STRIP1Q5VSL9 837 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 WDR93Q6P2C0 686 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 BOLLQ8N9W6 283 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 PNLDC1Q8NA58 520 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 ADAMTS18Q8TE60 1221 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 CLEC4CQ8WTT0 213 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 UBXN10Q96LJ8 280 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 FYTTD1Q96QD9 318 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 ABHD16BQ9H3Z7 469 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 PRDM13Q9H4Q3 707 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 RIOX1Q9H6W3 641 aa6.31□□□□□ -1.4
SMARCE1-219ENST00000583294 TTC34A8MYJ7 566 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 H3BNC9 293 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 HEXIM1O94992 359 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 BMP5P22003 454 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 SLC8A1P32418 973 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 INHBEP58166 350 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 ACTR2P61160 394 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 FBXO47Q5MNV8 452 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 PRAMEF17Q5VTA0 474 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 CYP26C1Q6V0L0 522 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 CHSY1Q86X52 802 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 COG8Q96MW5 612 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 G6PC2Q9NQR9 355 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 ASNSD1Q9NWL6 643 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 BAG5Q9UL15 447 aa6.3□□□□□ -1.4
SMARCE1-219ENST00000583294 FAM90A20PA6NIJ5 464 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 C16orf96A6NNT2 1141 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 BTBD19C9JJ37 291 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 POC1B-GALNT4F8VUJ3 575 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 PRYO14603 147 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 TK1P04183 234 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 CKMT1AP12532 417 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 NDUFS1P28331 727 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 STAT6P42226 847 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 CDK7P50613 346 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 PAPOLAP51003 745 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 RCAN1P53805 252 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 FOXL2P58012 376 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 KPNB1Q14974 876 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 SMAD1Q15797 465 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 TBRG1Q3YBR2 411 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 FBXO42Q6P3S6 717 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 RANBP10Q6VN20 620 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 HERC6Q8IVU3 1022 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 C16orf71Q8IYS4 520 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 GALNT4Q8N4A0 578 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 CEP70Q8NHQ1 597 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 RITA1Q96K30 269 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 RMI1Q9H9A7 625 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 GAR1Q9NY12 217 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 RCE1Q9Y256 329 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 B3GNT3Q9Y2A9 372 aa6.29□□□□□ -1.4
SMARCE1-219ENST00000583294 MBD3L5A6NJ08 208 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 UBE2Q2LH0YL09 131 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 CYP3A4P08684 503 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 CNTFP26441 200 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 TLE3Q04726 772 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 TMEM63BQ5T3F8 832 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 FCRLBQ6BAA4 426 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 KIAA1324Q6UXG2 1013 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 FAM98AQ8NCA5 519 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 SDCCAG3Q96C92 435 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 EVI5LQ96CN4 794 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 HIC2Q96JB3 615 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 GPR78Q96P69 363 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 TWSG1Q9GZX9 223 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 PRDM16Q9HAZ2 1276 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 PLEKHA2Q9HB19 425 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 RIC8AQ9NPQ8 531 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 ARL8BQ9NVJ2 186 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 SEMA5BQ9P283 1151 aa6.28□□□□□ -1.4
SMARCE1-219ENST00000583294 GTF2A1LQ9UNN4 478 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms