RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 VSTM1Q6UX27 236 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 TRABD2AQ86V40 505 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 ABI1Q8IZP0 508 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 CYP4X1Q8N118 509 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 OR10T2Q8NGX3 314 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 ETNK1Q9HBU6 452 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 TMEM51Q9NW97 253 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 CHMP2BQ9UQN3 213 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 ATXN2Q99700 1313 aaKnown RBP23.39■■□□□ 1.33
CCDC47-204ENST00000582252 COL4A4P53420 1690 aaPredicted RBP23.38■■□□□ 1.33
CCDC47-204ENST00000582252 MFSD11O43934 449 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 ITGB8P26012 769 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 SSTR1P30872 391 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 ELK3P41970 407 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 GLUD2P49448 558 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 TPI1P60174 286 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 PPARDQ03181 441 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 DPYSQ14117 519 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 NPAS4Q8IUM7 802 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 DCP1BQ8IZD4 617 aaKnown RBP23.38■■□□□ 1.33
CCDC47-204ENST00000582252 FBF1Q8TES7 1133 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 CYTH2Q99418 400 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 PRMT1Q99873 361 aaKnown RBP23.38■■□□□ 1.33
CCDC47-204ENST00000582252 MAGEB5Q9BZ81 275 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 PRKAG2Q9UGJ0 569 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 TEX264Q9Y6I9 313 aa23.38■■□□□ 1.33
CCDC47-204ENST00000582252 A0A0A0MRY4 1105 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 NCAM2O15394 837 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 APRTP07741 180 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 GSTA2P09210 222 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 CDK16Q00536 496 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 GKAP1Q5VSY0 366 aaPredicted RBP23.37■■□□□ 1.33
CCDC47-204ENST00000582252 BHLHA9Q7RTU4 235 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 VWCEQ96DN2 955 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 SGSM3Q96HU1 749 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 SPATA13Q96N96 652 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 SMC6Q96SB8 1091 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 EPAS1Q99814 870 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 RHOBTB2Q9BYZ6 727 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 WDCPQ9H6R7 721 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 XAB2Q9HCS7 855 aaKnown RBP23.37■■□□□ 1.33
CCDC47-204ENST00000582252 TMLHEQ9NVH6 421 aa23.37■■□□□ 1.33
CCDC47-204ENST00000582252 SMG5Q9UPR3 1016 aaKnown RBP23.37■■□□□ 1.33
CCDC47-204ENST00000582252 OPHN1O60890 802 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 EFCAB14O75071 495 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 CSF2RAP15509 400 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 STX2P32856 288 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 MSH2P43246 934 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 RABGGTBP53611 331 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 SEMA5AQ13591 1074 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 PRKD1Q15139 912 aaPredicted RBP23.36■■□□□ 1.33
CCDC47-204ENST00000582252 BSPRYQ5W0U4 402 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 COLGALT2Q8IYK4 626 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 COLEC11Q9BWP8 271 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 BRD8Q9H0E9 1235 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 ABHD14A-ACY1A0A1B0GW23 586 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 DCLK1O15075 740 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 ITGB1P05556 798 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 GBP2P32456 591 aaPredicted RBP23.36■■□□□ 1.33
CCDC47-204ENST00000582252 OR1G1P47890 313 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 CXCR3P49682 368 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 SLC18A1P54219 525 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 YWHAGP61981 247 aaKnown RBP eCLIP23.36■■□□□ 1.33
CCDC47-204ENST00000582252 SEMA3BQ13214 749 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 ADGRD1Q6QNK2 874 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 SRLQ86TD4 932 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 CRIPAKQ8N1N5 446 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 ANKRD42Q8N9B4 389 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 ZNF317Q96PQ6 595 aaPredicted RBP23.36■■□□□ 1.33
CCDC47-204ENST00000582252 RRP15Q9Y3B9 282 aaKnown RBP23.36■■□□□ 1.33
CCDC47-204ENST00000582252 IKBKGQ9Y6K9 419 aa23.36■■□□□ 1.33
CCDC47-204ENST00000582252 FAM47DPA6NHR8 397 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 PRPF4O43172 522 aaKnown RBP eCLIP23.35■■□□□ 1.33
CCDC47-204ENST00000582252 DDHD2O94830 711 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 KIAA0754O94854 1291 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 DRD4P21917 467 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 SERPINB6P35237 376 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 AP1B1Q10567 949 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 ANKRD20A2Q5SQ80 823 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 FAXCQ5TGI0 409 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 ANKRD20A1Q5TYW2 823 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 ANKRD20A3Q5VUR7 823 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 LRRTM3Q86VH5 581 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 CACNA2D3Q8IZS8 1091 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 ADAM32Q8TC27 787 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 TMEM209Q96SK2 561 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 PAFAH2Q99487 392 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 WDR83Q9BRX9 315 aaKnown RBP23.35■■□□□ 1.33
CCDC47-204ENST00000582252 DHRS4Q9BTZ2 278 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 TRABDQ9H4I3 376 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 ABCC13Q9NSE7 274 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 TBC1D13Q9NVG8 400 aa23.35■■□□□ 1.33
CCDC47-204ENST00000582252 SYN3O14994 580 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 GRIK1P39086 918 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 NFE2Q16621 373 aaPredicted RBP23.34■■□□□ 1.33
CCDC47-204ENST00000582252 TAX1BP1Q86VP1 789 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 ZNF280BQ86YH2 543 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 MGARPQ8TDB4 240 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 EDEM1Q92611 657 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 RNF34Q969K3 372 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms