RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 RPS24P62847 133 aaKnown RBP20.88■□□□□ 0.93
SS18-218ENST00000581021 CENPCQ03188 943 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 TMEM215Q68D42 235 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 LONP2Q86WA8 852 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 ZNF513Q8N8E2 541 aaPredicted RBP20.88■□□□□ 0.93
SS18-218ENST00000581021 ATRIPQ8WXE1 791 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 NT5C3BQ969T7 300 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 TMA16Q96EY4 203 aaKnown RBP20.88■□□□□ 0.93
SS18-218ENST00000581021 PRMT1Q99873 361 aaKnown RBP20.88■□□□□ 0.93
SS18-218ENST00000581021 PIGVQ9NUD9 493 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 MYO6Q9UM54 1294 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 GVINP1Q7Z2Y8 2422 aa20.88■□□□□ 0.93
SS18-218ENST00000581021 MYO18AQ92614 2054 aaKnown RBP20.87■□□□□ 0.93
SS18-218ENST00000581021 GOLGA6L19H0YKK7 550 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 GFRA3O60609 400 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 APOEP02649 317 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 HLA-FP30511 346 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 WASP42768 502 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 ATXN1P54253 815 aaKnown RBP20.87■□□□□ 0.93
SS18-218ENST00000581021 UBASH3AP57075 661 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 TPM4P67936 248 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 NME3Q13232 169 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 CRY1Q16526 586 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 MS4A13Q5J8X5 152 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 RAP1GAP2Q684P5 730 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 LRSAM1Q6UWE0 723 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 WDR5BQ86VZ2 330 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 EMC1Q8N766 993 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 CCDC26Q8TAB7 109 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 TBCBQ99426 244 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 EPC1Q9H2F5 836 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 TSPY26PQ9H489 355 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 CD248Q9HCU0 757 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 METTL5Q9NRN9 209 aaKnown RBP20.87■□□□□ 0.93
SS18-218ENST00000581021 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.87■□□□□ 0.93
SS18-218ENST00000581021 IFNKQ9P0W0 207 aa20.87■□□□□ 0.93
SS18-218ENST00000581021 EP300Q09472 2414 aaPredicted RBP20.86■□□□□ 0.93
SS18-218ENST00000581021 M0QYT0 321 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 TBL1XO60907 577 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 GGCXP38435 758 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 NRLP54845 237 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 ZNF445P59923 1031 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 PREPLQ4J6C6 727 aaPredicted RBP20.86■□□□□ 0.93
SS18-218ENST00000581021 RAB6CQ53S08 254 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 MON1BQ7L1V2 547 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 BNIPLQ7Z465 357 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 PHF13Q86YI8 300 aaPredicted RBP20.86■□□□□ 0.93
SS18-218ENST00000581021 CFAP52Q8N1V2 620 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 SORCS1Q8WY21 1168 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 LMLNQ96KR4 655 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 BTN2A3PQ96KV6 586 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 SLC2A11Q9BYW1 496 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 RAB6CQ9H0N0 254 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 TAS2R14Q9NYV8 317 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 EML5Q05BV3 1969 aa20.86■□□□□ 0.93
SS18-218ENST00000581021 MUC22E2RYF6 1773 aaPredicted RBP20.85■□□□□ 0.93
SS18-218ENST00000581021 APBB3O95704 486 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 TACR2P21452 398 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 SULT1E1P49888 294 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 IRAK1P51617 712 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 HSF5Q4G112 596 aaPredicted RBP20.85■□□□□ 0.93
SS18-218ENST00000581021 FIGNQ5HY92 759 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 ANKS1BQ7Z6G8 1248 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 CHSY1Q86X52 802 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 LGI2Q8N0V4 545 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 CAMKK1Q8N5S9 505 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 HJURPQ8NCD3 748 aaPredicted RBP20.85■□□□□ 0.93
SS18-218ENST00000581021 MSANTD4Q8NCY6 345 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 MDGA1Q8NFP4 955 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 TSTD1Q8NFU3 115 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 JOSD2Q8TAC2 188 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 KCNV2Q8TDN2 545 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 ERLEC1Q96DZ1 483 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 CFAP57Q96MR6 1250 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 TMPRSS4Q9NRS4 437 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 ABCB8Q9NUT2 735 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 SEPT11Q9NVA2 429 aaKnown RBP20.85■□□□□ 0.93
SS18-218ENST00000581021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.85■□□□□ 0.93
SS18-218ENST00000581021 CACNA2D2Q9NY47 1150 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 AIPL1Q9NZN9 384 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 STIM2Q9P246 746 aa20.85■□□□□ 0.93
SS18-218ENST00000581021 ZNF292O60281 2723 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 FAM186AA6NE01 2351 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 A0A1W2PQF6 199 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 TCRBV5S1A1TA0A578 114 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 WASH3PC4AMC7 463 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 ADCY5O95622 1261 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 LMNAP02545 664 aaKnown RBP20.84■□□□□ 0.93
SS18-218ENST00000581021 CCR1P32246 355 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 CD70P32970 193 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 NSFP46459 744 aaKnown RBP20.84■□□□□ 0.93
SS18-218ENST00000581021 CXCR3P49682 368 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 ASIC2Q16515 512 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 SLC25A52Q3SY17 297 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 MPP7Q5T2T1 576 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 ARTNQ5T4W7 220 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 ANO7Q6IWH7 933 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 KIAA1211LQ6NV74 962 aa20.84■□□□□ 0.93
SS18-218ENST00000581021 ZNF571Q7Z3V5 609 aaPredicted RBP20.84■□□□□ 0.93
SS18-218ENST00000581021 KIAA0907Q7Z7F0 614 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms