RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TMEM191CA6NGB0 347 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 MYO1FO00160 1098 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 ENDOD1O94919 500 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 GLULP15104 373 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 TFE3P19532 575 aaPredicted RBP16.09■□□□□ 0.17
SS18-216ENST00000580751 MAN1A1P33908 653 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 SLC1A1P43005 524 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 CXCR3P49682 368 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 ATP11AP98196 1134 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 AMPD2Q01433 879 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 SIGLEC14Q08ET2 396 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 ADGRF1Q5T601 910 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 C1orf228Q6PIY5 440 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 FAM217AQ8IXS0 508 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 ADGRG2Q8IZP9 1017 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 CPXM2Q8N436 756 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 ATP6V0D2Q8N8Y2 350 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 LRRC57Q8N9N7 239 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 FAM172AQ8WUF8 416 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 CENPIQ92674 756 aaPredicted RBP16.09■□□□□ 0.17
SS18-216ENST00000580751 BTN2A3PQ96KV6 586 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 IRX2Q9BZI1 471 aaPredicted RBP16.09■□□□□ 0.17
SS18-216ENST00000580751 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
SS18-216ENST00000580751 ARHGEF3Q9NR81 526 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 TFR2Q9UP52 801 aa16.09■□□□□ 0.17
SS18-216ENST00000580751 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 ACSL4O60488 711 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 MOCS2O96007 188 aaPredicted RBP16.08■□□□□ 0.16
SS18-216ENST00000580751 CYP17A1P05093 508 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 PSMA2P25787 234 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 PRKCQQ04759 706 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 DHCR24Q15392 516 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 MLF2Q15773 248 aaPredicted RBP16.08■□□□□ 0.16
SS18-216ENST00000580751 CDO1Q16878 200 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 C15orf59Q2T9L4 293 aaPredicted RBP16.08■□□□□ 0.16
SS18-216ENST00000580751 SLC44A4Q53GD3 710 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 SHDQ96IW2 340 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 ADAM33Q9BZ11 813 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 WDCPQ9H6R7 721 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 SPHK2Q9NRA0 654 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 HEBP1Q9NRV9 189 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
SS18-216ENST00000580751 GRID2IPA4D2P6 1211 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 CTAGE9A4FU28 777 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 PI4K2BG5E9Z4 385 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 BUB1O43683 1085 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 MOCS3O95396 460 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 CYBBP04839 570 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 ADH5P11766 374 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 PRLRP16471 622 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 CASQ1P31415 396 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 OGDHQ02218 1023 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 GAD2Q05329 585 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 PIGHQ14442 188 aaPredicted RBP16.07■□□□□ 0.16
SS18-216ENST00000580751 LY6G5CQ5SRR4 150 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 ACBD5Q5T8D3 534 aaPredicted RBP16.07■□□□□ 0.16
SS18-216ENST00000580751 RHBDF2Q6PJF5 856 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 RALGPS2Q86X27 583 aaPredicted RBP16.07■□□□□ 0.16
SS18-216ENST00000580751 NIPA2Q8N8Q9 360 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 EXOC4Q96A65 974 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 OSGEPQ9NPF4 335 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 ARHGEF38Q9NXL2 777 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 MARK1Q9P0L2 795 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 ANAPC7Q9UJX3 599 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 CA14Q9ULX7 337 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 CAPN6Q9Y6Q1 641 aa16.07■□□□□ 0.16
SS18-216ENST00000580751 OTOL1A6NHN0 477 aaPredicted RBP16.06■□□□□ 0.16
SS18-216ENST00000580751 MIF4GDA9UHW6 222 aaKnown RBP16.06■□□□□ 0.16
SS18-216ENST00000580751 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 MAN2B1O00754 1011 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 HOXC11O43248 304 aaPredicted RBP16.06■□□□□ 0.16
SS18-216ENST00000580751 BUB1BO60566 1050 aaPredicted RBP16.06■□□□□ 0.16
SS18-216ENST00000580751 PALMO75781 387 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 RNF8O76064 485 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 CTHP32929 405 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 HDAC4P56524 1084 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 ANO4Q32M45 955 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 ARL13BQ3SXY8 428 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 SH3PXD2AQ5TCZ1 1133 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 SYT10Q6XYQ8 523 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 TPRG1Q6ZUI0 275 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 DAAM2Q86T65 1068 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 FAM131BQ86XD5 332 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 TMEM25Q86YD3 366 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 SIX5Q8N196 739 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 SLC35F6Q8N357 371 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 NAPGQ99747 312 aaPredicted RBP16.06■□□□□ 0.16
SS18-216ENST00000580751 DNAI1Q9UI46 699 aa16.06■□□□□ 0.16
SS18-216ENST00000580751 COL4A3Q01955 1670 aa16.05■□□□□ 0.16
SS18-216ENST00000580751 TECTAO75443 2155 aa16.05■□□□□ 0.16
SS18-216ENST00000580751 TYW5A2RUC4 315 aaKnown RBP16.05■□□□□ 0.16
SS18-216ENST00000580751 PAGE1O75459 146 aa16.05■□□□□ 0.16
SS18-216ENST00000580751 PROSCO94903 275 aa16.05■□□□□ 0.16
SS18-216ENST00000580751 GJA4P35212 333 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms