RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 NFATC1O95644 943 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 KLKB1P03952 638 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 IL9P15248 144 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 SP100P23497 879 aaPredicted RBP14.78□□□□□ -0.04
SKA2-205ENST00000580541 FCARP24071 287 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ARL4AP40617 200 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ATXN1P54253 815 aaKnown RBP14.78□□□□□ -0.04
SKA2-205ENST00000580541 ZXDBP98169 803 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
SKA2-205ENST00000580541 HTR4Q13639 388 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 KRT81Q14533 505 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 RPS6KA1Q15418 735 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 MPPE1Q53F39 396 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 TTC39BQ5VTQ0 682 aaPredicted RBP14.78□□□□□ -0.04
SKA2-205ENST00000580541 VITQ6UXI7 678 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 NT5DC3Q86UY8 548 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ZSCAN30Q86W11 494 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ADGRG2Q8IZP9 1017 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ARFGAP1Q8N6T3 406 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ATRIPQ8WXE1 791 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 FGF14Q92915 247 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 EXOC4Q96A65 974 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 TMA16Q96EY4 203 aaKnown RBP14.78□□□□□ -0.04
SKA2-205ENST00000580541 ASB2Q96Q27 587 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 ADAM33Q9BZ11 813 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 DHX35Q9H5Z1 703 aaKnown RBP14.78□□□□□ -0.04
SKA2-205ENST00000580541 PRDM16Q9HAZ2 1276 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 KCNK12Q9HB15 430 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 PRDM6Q9NQX0 595 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 PCDHA3Q9Y5H8 950 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 NUMBLQ9Y6R0 609 aa14.78□□□□□ -0.04
SKA2-205ENST00000580541 KIF2AO00139 706 aaPredicted RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 DAPK3O43293 454 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 ZRANB2O95218 330 aaKnown RBP eCLIP14.77□□□□□ -0.05
SKA2-205ENST00000580541 ADH1CP00326 375 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 RARAP10276 462 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 TNNT1P13805 278 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 TACR2P21452 398 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CTNNA2P26232 953 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CTNNA1P35221 906 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 HCAR3P49019 387 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 RWDD2BP57060 319 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 GNG11P61952 73 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 PFKPQ01813 784 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 SLC25A11Q02978 314 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 AUHQ13825 339 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 PREPLQ4J6C6 727 aaPredicted RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 MS4A13Q5J8X5 152 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 MPP7Q5T2T1 576 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CHSY1Q86X52 802 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 VSIG1Q86XK7 387 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 BBS7Q8IWZ6 715 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 FAM217AQ8IXS0 508 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CPA6Q8N4T0 437 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CCDC185Q8N715 623 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CSGALNACT1Q8TDX6 532 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 HSPH1Q92598 858 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 RBM41Q96IZ5 413 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 KXD1Q9BQD3 176 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 SNRNP25Q9BV90 132 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 MAK16Q9BXY0 300 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 CATSPERBQ9H7T0 1116 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 RCOR3Q9P2K3 495 aaPredicted RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 PPARGC1AQ9UBK2 798 aaKnown RBP14.77□□□□□ -0.05
SKA2-205ENST00000580541 HS3ST4Q9Y661 456 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 CAPN6Q9Y6Q1 641 aa14.77□□□□□ -0.05
SKA2-205ENST00000580541 H3BRJ5 948 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 GREM1O60565 184 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 GDI1P31150 447 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 CDH6P55285 790 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 OXCT1P55809 520 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 COPS2P61201 443 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 DPYSL2Q16555 572 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 KCNT1Q5JUK3 1230 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 MEI1Q5TIA1 1274 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 RAP1GAP2Q684P5 730 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 KATNAL2Q8IYT4 538 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 LGI2Q8N0V4 545 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 SLC44A3Q8N4M1 653 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 HJURPQ8NCD3 748 aaPredicted RBP14.76□□□□□ -0.05
SKA2-205ENST00000580541 DDI1Q8WTU0 396 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 RPRD1AQ96P16 312 aaPredicted RBP14.76□□□□□ -0.05
SKA2-205ENST00000580541 FAM83CQ9BQN1 747 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 TRPV5Q9NQA5 729 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 SPHK2Q9NRA0 654 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.76□□□□□ -0.05
SKA2-205ENST00000580541 MYO10Q9HD67 2058 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 REV3LO60673 3130 aa14.76□□□□□ -0.05
SKA2-205ENST00000580541 USP27XA6NNY8 438 aa14.75□□□□□ -0.05
SKA2-205ENST00000580541 ZNF487B1APH4 448 aa14.75□□□□□ -0.05
SKA2-205ENST00000580541 E9PAM4 449 aa14.75□□□□□ -0.05
SKA2-205ENST00000580541 EEF2KO00418 725 aaKnown RBP14.75□□□□□ -0.05
SKA2-205ENST00000580541 FGF10O15520 208 aaPredicted RBP14.75□□□□□ -0.05
SKA2-205ENST00000580541 CREB3O43889 395 aa14.75□□□□□ -0.05
SKA2-205ENST00000580541 FTCDO95954 541 aa14.75□□□□□ -0.05
SKA2-205ENST00000580541 IL1R2P27930 398 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms