RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 IGLV3-27P01718 113 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 ATP1A3P13637 1013 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 KIR2DL1P43626 348 aaPredicted RBP25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 EOGTQ5NDL2 527 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 ADGRF1Q5T601 910 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 TAF3Q5VWG9 929 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 DAB2IPQ5VWQ8 1189 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 OR6B2Q6IFH4 312 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 TMEM92Q6UXU6 159 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 ZNF677Q86XU0 584 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 DHX40Q8IX18 779 aaKnown RBP25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 ALLCQ8N6M5 410 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 IL17RCQ8NAC3 791 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 ERGIC2Q96RQ1 377 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 TJP2Q9UDY2 1190 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 TLR6Q9Y2C9 796 aa25.84■■□□□ 1.73
CDC42EP4-205ENST00000580315 SYCE3A1L190 88 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 GIPC1O14908 333 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 HSF2BPO75031 334 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 GFPT2O94808 682 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 LSM8O95777 96 aaKnown RBP25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 HNRNPLP14866 589 aaKnown RBP eCLIP25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 SOX5P35711 763 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 STAT1P42224 750 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 EMC10Q5UCC4 262 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 SYPL2Q5VXT5 272 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 APTXQ7Z2E3 356 aaKnown RBP25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 CYP2U1Q7Z449 544 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 ZDHHC17Q8IUH5 632 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 ZNF513Q8N8E2 541 aaPredicted RBP25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 TXNDC5Q8NBS9 432 aaKnown RBP25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 MSANTD4Q8NCY6 345 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 OLIG1Q8TAK6 271 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 AZIN2Q96A70 460 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 DDX50Q9BQ39 737 aaKnown RBP25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 FBXO10Q9UK96 956 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 STARD13Q9Y3M8 1113 aa25.83■■□□□ 1.73
CDC42EP4-205ENST00000580315 PATE3B3GLJ2 98 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 ERBB2P04626 1255 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 CISD3P0C7P0 127 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 CHRM1P11229 460 aaPredicted RBP25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 CDH5P33151 784 aaPredicted RBP25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 JAM2P57087 298 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 CDK17Q00537 523 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 PTPN20Q4JDL3 420 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 FILIP1LQ4L180 1135 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 DCAF6Q58WW2 860 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 FAM183BPQ6ZVS7 135 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 NOP9Q86U38 636 aaKnown RBP25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 TAC4Q86UU9 113 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 ADAM32Q8TC27 787 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 EPS8L1Q8TE68 723 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 TMA16Q96EY4 203 aaKnown RBP25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 FUCA2Q9BTY2 467 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 SLC2A11Q9BYW1 496 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 IRX2Q9BZI1 471 aaPredicted RBP25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 SLC27A6Q9Y2P4 619 aa25.82■■□□□ 1.72
CDC42EP4-205ENST00000580315 CDX4O14627 284 aaPredicted RBP25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 EPHB6O15197 1021 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 ACSL4O60488 711 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 TSPAN3O60637 253 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 ALDH1A2O94788 518 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 TRUB2O95900 331 aaKnown RBP25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 SLC6A3Q01959 620 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 TAF5Q15542 800 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 SKOR2Q2VWA4 1001 aaPredicted RBP25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 PIWIL1Q96J94 861 aaKnown RBP25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 FCRL2Q96LA5 508 aaPredicted RBP25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 POLMQ9NP87 494 aaPredicted RBP25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 TMEM9BQ9NQ34 198 aa25.81■■□□□ 1.72
CDC42EP4-205ENST00000580315 SGK1O00141 431 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 IRAK2O43187 625 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 APOEP02649 317 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 DHPSP49366 369 aaPredicted RBP25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 TPM4P67936 248 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 IRX4P78413 519 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 SH3PXD2AQ5TCZ1 1133 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 SDE2Q6IQ49 451 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 OLFML1Q6UWY5 402 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 SLC26A9Q7LBE3 791 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 ERICH1Q86X53 443 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 DEFB106AQ8N104 65 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 SLC39A13Q96H72 371 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 SLC2A13Q96QE2 648 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 FAM204AQ9H8W3 233 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 NUP205Q92621 2012 aa25.8■■□□□ 1.72
CDC42EP4-205ENST00000580315 PRRT4C9JH25 899 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 MMEP08473 750 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 P2RY2P41231 377 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 E2F5Q15329 346 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 ANKS1BQ7Z6G8 1248 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 RLN3Q8WXF3 142 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 PIGKQ92643 395 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 C18orf8Q96DM3 657 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 P2RY11Q96G91 374 aa25.79■■□□□ 1.72
CDC42EP4-205ENST00000580315 THADAQ6YHU6 1953 aa25.78■■□□□ 1.72
CDC42EP4-205ENST00000580315 TYW5A2RUC4 315 aaKnown RBP25.78■■□□□ 1.72
CDC42EP4-205ENST00000580315 DAB1O75553 588 aa25.78■■□□□ 1.72
CDC42EP4-205ENST00000580315 GRAP2O75791 330 aa25.78■■□□□ 1.72
CDC42EP4-205ENST00000580315 PROS1P07225 676 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms