RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SNX25Q9H3E2 840 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SGK2Q9HBY8 427 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DMAP1Q9NPF5 467 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ELOVL2Q9NXB9 296 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 A0A087X0B3 334 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CBX4O00257 560 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KCNK3O14649 394 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TIMM44O43615 452 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LZTS3O60299 673 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TNNC2P02585 160 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KRT18P05783 430 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ACP1P24666 158 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PRKCHP24723 683 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ATP5C1P36542 298 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GNL1P36915 607 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DCTP40126 519 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 UBA7P41226 1012 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RXRGP48443 463 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ARRB1P49407 418 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 E2F1Q01094 437 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 INSM1Q01101 510 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IL9RQ01113 521 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ALCAMQ13740 583 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SHBQ15464 509 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SURF1Q15526 300 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GEN1Q17RS7 908 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TTC31Q49AM3 519 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KCNT1Q5JUK3 1230 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 L1TD1Q5T7N2 865 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FYB2Q5VWT5 728 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LAYNQ6UX15 382 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SERPINA13PQ6UXR4 307 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CLEC17AQ6ZS10 378 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FAM124AQ86V42 546 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GATAD2AQ86YP4 633 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SCAMP5Q8TAC9 235 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KCNE4Q8WWG9 221 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CALML4Q96GE6 196 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PLIN2Q99541 437 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 B3GNT5Q9BYG0 378 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SLC2A11Q9BYW1 496 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EPN3Q9H201 632 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZHX3Q9H4I2 956 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FBXO44Q9H4M3 255 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PDE11AQ9HCR9 933 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GDF3Q9NR23 364 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TLR8Q9NR97 1041 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 BLOC1S4Q9NUP1 217 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CHORDC1Q9UHD1 332 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZNF510Q9Y2H8 683 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 NME7Q9Y5B8 376 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CCDC168Q8NDH2 2452 aa7.54□□□□□ -1.2
CDK5RAP3-209ENST00000578663 A0A1W2PPC4 97 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 C10orf142B7Z368 130 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GADD45BO75293 160 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FSBPO95073 299 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 STAU1O95793 577 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IGHV4-34P06331 123 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EPHX1P07099 455 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RNF224P0DH78 156 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 HOXB4P17483 251 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 COL8A1P27658 744 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CHKAP35790 457 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LSSP48449 732 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SKOR1P84550 965 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RESP18Q5W5W9 173 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KIAA0895LQ68EN5 471 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SCARA3Q6AZY7 606 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 USP30Q70CQ3 517 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DYMQ7RTS9 669 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KANSL1Q7Z3B3 1105 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CACUL1Q86Y37 369 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 WDR49Q8IV35 697 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZNF276Q8N554 614 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EID2Q8N6I1 236 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 OR5B17Q8NGF7 314 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 OR6B3Q8NGW1 331 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RAD54LQ92698 747 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GOLGA1Q92805 767 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SAAL1Q96ER3 474 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SMARCD1Q96GM5 515 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FAM84AQ96KN4 292 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MMS19Q96T76 1030 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MRPL45Q9BRJ2 306 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IKZF4Q9H2S9 585 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TMEM245Q9H330 911 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ERVMER34-1Q9H9K5 563 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 OLFML3Q9NRN5 406 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 THSD1Q9NS62 852 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SCML1Q9UN30 329 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PLXNA2O75051 1894 aa7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-209ENST00000578663 A0A1B0GVL5 298 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms