RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CAPN9O14815 690 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 RFPL2O75678 378 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 GRAP2O75791 330 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 RNF8O76064 485 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 GJB6O95452 261 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 IGLV3-25P01717 112 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 RALAP11233 206 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 NCAM1P13591 858 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 PSMA2P25787 234 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 PGFP49763 221 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 HYAL1Q12794 435 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 ADAM15Q13444 863 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 DCAF6Q58WW2 860 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 ARSJQ5FYB0 599 aaPredicted RBP8.34□□□□□ -1.07
COPS3-215ENST00000578317 TCEAL5Q5H9L2 206 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 ZNF569Q5MCW4 686 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 MEI1Q5TIA1 1274 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 BTBD8Q5XKL5 378 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 TMEM150AQ86TG1 271 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 TADA2BQ86TJ2 420 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 NT5DC3Q86UY8 548 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 TMC8Q8IU68 726 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 EMC1Q8N766 993 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 STKLD1Q8NE28 680 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 VN1R2Q8NFZ6 395 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 CD101Q93033 1021 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 CCDC74AQ96AQ1 378 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
COPS3-215ENST00000578317 PRDM12Q9H4Q4 367 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 OLA1Q9NTK5 396 aaKnown RBP8.34□□□□□ -1.07
COPS3-215ENST00000578317 OSER1Q9NX31 292 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 GMIPQ9P107 970 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 ZMYM5Q9UJ78 669 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 MAGED2Q9UNF1 606 aaPredicted RBP8.34□□□□□ -1.07
COPS3-215ENST00000578317 NAALADL1Q9UQQ1 740 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 CLUHO75153 1309 aa8.34□□□□□ -1.08
COPS3-215ENST00000578317 CCDC195A0A1B0GUA6 201 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 MIF4GDA9UHW6 222 aaKnown RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 ZNF197O14709 1029 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 MAN1A2O60476 641 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 LRCH4O75427 683 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 SRGAP2BP0DMP2 458 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 RARGP13631 454 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 SNRPBP14678 240 aaKnown RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 EPB42P16452 691 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 PRLRP16471 622 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 COMTP21964 271 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 CDC25CP30307 473 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 KPNA1P52294 538 aaPredicted RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 HDAC4P56524 1084 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 MTA1Q13330 715 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 BOLA3Q53S33 107 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 HECTD3Q5T447 861 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 CC2D1AQ6P1N0 951 aaPredicted RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 POLNQ7Z5Q5 900 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 PSTKQ8IV42 348 aaKnown RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 ARFGAP1Q8N6T3 406 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 RNF139Q8WU17 664 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 HES6Q96HZ4 224 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 CFAP57Q96MR6 1250 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 SMOC2Q9H3U7 446 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 SFXN1Q9H9B4 322 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 ASAH2Q9NR71 780 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 DNMT3BQ9UBC3 853 aaKnown RBP8.33□□□□□ -1.08
COPS3-215ENST00000578317 AMFRQ9UKV5 643 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 PCDHA3Q9Y5H8 950 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
COPS3-215ENST00000578317 CCDC66A2RUB6 948 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 M0QYT0 321 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CCL16O15467 120 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TLR5O60602 858 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TADA3O75528 432 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CSPG5O95196 566 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 GLP2RO95838 553 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 OLFM2O95897 454 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TRUB2O95900 331 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 OAS1P00973 400 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 DDX6P26196 483 aaKnown RBP eCLIP8.32□□□□□ -1.08
COPS3-215ENST00000578317 CTNNA2P26232 953 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 GABRR2P28476 465 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 GBP1P32455 592 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 RDXP35241 583 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 ATP5C1P36542 298 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 CXCR3P49682 368 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 PEX5P50542 639 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 AIF1P55008 147 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 RING1Q06587 406 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 IFRD2Q12894 506 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 HADHQ16836 314 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.32□□□□□ -1.08
COPS3-215ENST00000578317 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 PAPD7Q5XG87 772 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 LRRC69Q6ZNQ3 347 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 GAREM2Q75VX8 874 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms