RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 C8orf48Q96LL4 319 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 GPR62Q9BZJ7 368 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 PRDM12Q9H4Q4 367 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 INTS9Q9NV88 658 aaKnown RBP28.57■■■□□ 2.16
LIMD2-203ENST00000578067 PCDHB5Q9Y5E4 795 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 BRCA2P51587 3418 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 FOXO6A8MYZ6 492 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 TPSB2P20231 275 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 SLC11A1P49279 550 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 NR1H3Q13133 447 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 TPSAB1Q15661 275 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 SCD5Q86SK9 330 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 IGDCC3Q8IVU1 814 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 NETO2Q8NC67 525 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 CCNYQ8ND76 341 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 P2RY11Q96G91 374 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 ACSS3Q9H6R3 686 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 MARCH5Q9NX47 278 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 NR2E3Q9Y5X4 410 aa28.56■■■□□ 2.16
LIMD2-203ENST00000578067 OR6C75A6NL08 312 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 TRIM66O15016 1216 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 AVILO75366 819 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 CREB1P16220 341 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 SEMA5AQ13591 1074 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 ZNF280DQ6N043 979 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 CAND1Q86VP6 1230 aaKnown RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 FBF1Q8TES7 1133 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 CCT8L2Q96SF2 557 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 IRAK2O43187 625 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 ZNF189O75820 626 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 FGFR3P22607 806 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 CYP2C18P33260 490 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 ATN1P54259 1190 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 GEMIN4P57678 1058 aaKnown RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 KLHL38Q2WGJ6 581 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 NUP93Q8N1F7 819 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 ATXN2LQ8WWM7 1075 aaKnown RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 MRPL9Q9BYD2 267 aaKnown RBP28.55■■■□□ 2.16
LIMD2-203ENST00000578067 OSBPL2Q9H1P3 480 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 SMOC2Q9H3U7 446 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 HIPK3Q9H422 1215 aa28.55■■■□□ 2.16
LIMD2-203ENST00000578067 BRAFP15056 766 aa28.54■■■□□ 2.16
LIMD2-203ENST00000578067 FDFT1P37268 417 aa28.54■■■□□ 2.16
LIMD2-203ENST00000578067 MAGEA11P43364 429 aa28.54■■■□□ 2.16
LIMD2-203ENST00000578067 BRMS1LQ5PSV4 323 aa28.54■■■□□ 2.16
LIMD2-203ENST00000578067 ARHGEF38Q9NXL2 777 aa28.54■■■□□ 2.16
LIMD2-203ENST00000578067 SNX10Q9Y5X0 201 aa28.54■■■□□ 2.16
LIMD2-203ENST00000578067 TMEM120BA0PK00 339 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 RNF103O00237 685 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 NCAM2O15394 837 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 OPHN1O60890 802 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 FAM107AO95990 144 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 CXCL10P02778 98 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 PGFP49763 221 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 CCL23P55773 120 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 DDR2Q16832 855 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 ANKRD33Q7Z3H0 272 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 SRRM1Q8IYB3 904 aaKnown RBP28.53■■■□□ 2.16
LIMD2-203ENST00000578067 PGLYRP2Q96PD5 576 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 TMEM175Q9BSA9 504 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 NMUR1Q9HB89 426 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 PSMC3IPQ9P2W1 217 aaPredicted RBP28.53■■■□□ 2.16
LIMD2-203ENST00000578067 HCSTQ9UBK5 93 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 SCML2Q9UQR0 700 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 RASA4BC9J798 803 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 RASA4O43374 803 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 SPAG6O75602 509 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 LRIG2O94898 1065 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 CCT5P48643 541 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 DENND5BQ6ZUT9 1274 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 AGGF1Q8N302 714 aaeCLIP28.53■■■□□ 2.16
LIMD2-203ENST00000578067 COLGALT1Q8NBJ5 622 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 FBXO44Q9H4M3 255 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 KCNK9Q9NPC2 374 aa28.53■■■□□ 2.16
LIMD2-203ENST00000578067 A0A1W2PQH9 124 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 TBKBP1A7MCY6 615 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 PARNO95453 639 aaKnown RBP28.52■■■□□ 2.16
LIMD2-203ENST00000578067 EPHB2P29323 1055 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 GPR15P49685 360 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 SDHAF4Q5VUM1 108 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 FUT10Q6P4F1 479 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 SLC39A5Q6ZMH5 540 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 TP53INP2Q8IXH6 220 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 ZNF473Q8WTR7 871 aaKnown RBP28.52■■■□□ 2.16
LIMD2-203ENST00000578067 LRRC39Q96DD0 335 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 B3GALT6Q96L58 329 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 ZNF638Q14966 1978 aaKnown RBP28.52■■■□□ 2.16
LIMD2-203ENST00000578067 ELAVL2Q12926 359 aaKnown RBP28.52■■■□□ 2.16
LIMD2-203ENST00000578067 TRABD2AQ86V40 505 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 MON1AQ86VX9 555 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 CASP10Q92851 521 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 HAPLN3Q96S86 360 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 SEPT10Q9P0V9 454 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 SFMBT1Q9UHJ3 866 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 RSPH14Q9UHP6 348 aa28.52■■■□□ 2.16
LIMD2-203ENST00000578067 GALTP07902 379 aa28.51■■■□□ 2.15
LIMD2-203ENST00000578067 MAGEA3P43357 314 aa28.51■■■□□ 2.15
LIMD2-203ENST00000578067 WASHC5Q12768 1159 aa28.51■■■□□ 2.15
LIMD2-203ENST00000578067 NPWQ8N729 165 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms